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AI is still seen as a magic black box, it is non-intuitive, and difficult for people to understand and trust. In the medical image analysis field, this problem is amplified and leads to a limited adoption of such AI systems. The proposed projects aim to adapt the exciting explainability tools for the medical domain to demystify and better explai…

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Wenhua-Hu/DeepKnee

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University of Amsterdam AI / XAI project for Medical Organization Quin

  • conda create --name DeepKnee python=3.8.8
  • conda activate DeepKnee
  • git clone https://github.com/whu-linuxer/DeepKnee.git
  • cd DeepKnee/apps/data/models && mkdir models
  • download the models into directory: models/
  • change the model name in correspondence with the names in apps/config.py
  • pip install -r requirements.txt
  • python run.py

Group Members: Lukas, Jordy, Anna and Wenhua

Contact: Wenhua Hu

Models and Datasets Movie introduction

GUI Functionalities:

  • support to search for patient from system - Here we use the local lightweighted database sqllites
  • support to update patient personal information and radiographs data, the latest radiographs are ahead of the other radiographs (clinician can focus on the new radiographs being received)
  • support to do prediction and explainable analysis in parallel
  • support to zoom in the radiographs
  • provide thumbnails to hint the progress of processing (HEATMAP, BOUNDINGBOX AND LIME)
  • support to choose 6 kinds of single models
  • support to switch among radiographs for comparison
  • provide different channels for both left and right knees
  • support to give confidence score for 5 grades
  • support to give a feedback / decison on top of a specific XAI image (Clicking on the thumbnail to switch the corresponding comment box, Quin could evaluate or improve the model on top of these data)
  • support to show the metrics on top of each model being selected (the question mark can show the desc on hovering)

Notes: the Lime needs some minutes to analysis

Inference:

Inference of DeepKnee

Metrics:

Metrics of DeepKnee

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AI is still seen as a magic black box, it is non-intuitive, and difficult for people to understand and trust. In the medical image analysis field, this problem is amplified and leads to a limited adoption of such AI systems. The proposed projects aim to adapt the exciting explainability tools for the medical domain to demystify and better explai…

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