Make error message more explicit that an excecutable is not found and…

[kdund]

… how to fix

[github-actions]

Pull Request Test Coverage Report for Build 6831618623

• 0 of 0 changed or added relevant lines in 0 files are covered.
• 1 unchanged line in 1 file lost coverage.
• Overall coverage decreased (-0.07%) to 91.655%

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Files with Coverage Reduction	New Missed Lines	%
alea/model.py	1	85.64%

Totals
Change from base Build 6817410021:	-0.07%
Covered Lines:	1351
Relevant Lines:	1474

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💛 - Coveralls

[dachengx]

@kdund For users they should append .local/bin to their PATH like export PATH=$HOME/.local/bin. For developers, they should append $HOME/alea/bin. Because when editing $HOME/alea/bin, developers might hope to see the effect of modification immediately, but the editing on $HOME/alea/bin will not change .local/bin(unless reinstall alea).

[kdund]

Is this in our current installation instructions?

(Also, in a jupyter notebook, as far as I can tell, it does not run my .bash_profile anyways to set env)

[dachengx]

Is this in our current installation instructions?

(Also, in a jupyter notebook, as far as I can tell, it does not run my .bash_profile anyways to set env)

Did you reopen the terminal and submit the jupyter job? Or run source .bash_profile before submitting?

[dachengx]

That information is not in the current instruction. We should add that.

[kdund]

Is this in our current installation instructions?
(Also, in a jupyter notebook, as far as I can tell, it does not run my .bash_profile anyways to set env)

Did you reopen the terminal and submit the jupyter job? Or run source .bash_profile before submitting?

I submit jupyter notebooks from my mac using

ssh -v midway2 /home/kmoraa/Software/env_starter/start_jupyter.py

and then I now do

import os
os.environ["PATH"] += ":" + "/home/kmoraa/Software/alea/bin/"
os.environ["PATH"] += ":" + "/software/slurm-current-el7-x86_64/bin/"

Not quite successful yet-- utilix is not finding sbatch :/

[dachengx]

I submit jupyter notebooks from my mac using

ssh -v midway2 /home/kmoraa/Software/env_starter/start_jupyter.py

and then I now do

import os
os.environ["PATH"] += ":" + "/home/kmoraa/Software/alea/bin/"
os.environ["PATH"] += ":" + "/software/slurm-current-el7-x86_64/bin/"

Not quite successful yet-- utilix is not finding sbatch :/

Do you want to submit jobs through jupyter notebook? Btw, which alea-submission can tell you the place of alea-submission. And I added export PATH=$HOME/.local/bin:$HOME/local/bin:$PATH to .bashrc.