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Update yields and clustering #751

Update yields and clustering

Update yields and clustering #751

Workflow file for this run

# copied from https://github.com/XENONnT/straxen/blob/master/.github/workflows/pytest.yml
# Test fuse on each PR.
# We run three types of tests:
# - Pytest -> these are the "normal" tests and should be run for all
# python versions
# - Coveralls -> this is to see if we are covering all our lines of
# code with our tests. The results get uploaded to
# coveralls.io/github/XENONnT/fuse
name: Test package
# Trigger this code when a new release is published
on:
push:
branches: [ main ]
pull_request:
branches: [ main ]
jobs:
build:
runs-on: ${{ matrix.os }}
timeout-minutes: 30
env:
HAVE_ACCESS_TO_SECRETS: ${{ secrets.RUNDB_API_URL }}
strategy:
fail-fast: false
matrix:
os: [ "ubuntu-latest" ]
python-version: [ "3.9", "3.10" ]
test: [ 'coveralls' ]
steps:
# Setup and installation
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Checkout repo
uses: actions/checkout@v4
- name: Install dependencies
# following https://github.com/NESTCollaboration/nestpy/blob/master/README.md
run: |
python -m pip install --upgrade pip
python -m pip install pytest coverage coveralls
git clone https://github.com/NESTCollaboration/nestpy.git
cd nestpy
git submodule update --init --recursive
git checkout fb3804e
pip install .
cd ..
rm -rf nestpy
- name: Start MongoDB
uses: supercharge/mongodb-github-action@1.10.0
with:
mongodb-version: 4.4.1
- name: patch utilix file
# Secrets and required files
# Patch this file if we want to have access to the database
run: bash .github/scripts/create_readonly_utilix_config.sh
env:
# RunDB
RUNDB_API_URL: ${{ secrets.RUNDB_API_URL }}
RUNDB_API_USER_READONLY: ${{ secrets.RUNDB_API_USER_READONLY }}
RUNDB_API_PASSWORD_READONLY: ${{ secrets.RUNDB_API_PASSWORD_READONLY}}
PYMONGO_URL: ${{ secrets.PYMONGO_URL }}
PYMONGO_USER: ${{ secrets.PYMONGO_USER }}
PYMONGO_PASSWORD: ${{ secrets.PYMONGO_PASSWORD }}
PYMONGO_DATABASE: ${{ secrets.PYMONGO_DATABASE }}
# SCADA
SCADA_URL: ${{ secrets.SCADA_URL }}
SCADA_VALUE_URL: ${{ secrets.SCADA_VALUE_URL }}
SCADA_USER: ${{ secrets.SCADA_USER }}
SCADA_LOGIN_URL: ${{ secrets.SCADA_LOGIN_URL }}
SCADA_PWD: ${{ secrets.SCADA_PWD }}
- name: Install fuse
run: |
pip install .
- name: Test package and report to coveralls
# This is running a normal test
env:
TEST_MONGO_URI: 'mongodb://localhost:27017/'
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
if: env.HAVE_ACCESS_TO_SECRETS != null
run: |
coverage run --source=fuse -m pytest --durations 0 -v
coveralls --service=github
coverage report
- name: goodbye
run: echo "tests done, bye bye"