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@YangLab

YangLab

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  1. CLEAR CLEAR Public

    direct comparison of circular and linear RNA expression

    Python 20 11

  2. RADAR RADAR Public

    RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.

    Perl 17 8

  3. CDCscreen CDCscreen Public

    Source code for the computational analysis of functional circular RNAs screening using the CRISPR-Cas13 system

    Shell 7 3

  4. CIRCexplorer2 CIRCexplorer2 Public

    circular RNA analysis toolset

    Python 76 42

  5. CIRCshapemapper CIRCshapemapper Public

    Python 2 1

  6. SCAPTURE SCAPTURE Public

    Shell 18 4

Repositories

Showing 10 of 21 repositories
  • YangLab.github.io Public
    YangLab/YangLab.github.io’s past year of commit activity
    CSS 0 0 0 0 Updated Oct 28, 2024
  • CIRCexplorer2 Public

    circular RNA analysis toolset

    YangLab/CIRCexplorer2’s past year of commit activity
    Python 76 42 18 0 Updated Sep 8, 2024
  • DEMINING Public

    DEMINING: a stepwise computational framework to directly detect expressed DNA and RNA mutations in RNA deep sequencing data (DEMINING).

    YangLab/DEMINING’s past year of commit activity
    Shell 6 2 3 0 Updated Jul 31, 2024
  • CIRCshapemapper Public
    YangLab/CIRCshapemapper’s past year of commit activity
    Python 2 1 0 0 Updated Jan 19, 2024
  • SCAPTURE Public
    YangLab/SCAPTURE’s past year of commit activity
    Shell 18 4 8 0 Updated Jan 9, 2024
  • Epitranscriptomic-maps-of-5-methylcytosine Public

    This is the bioinformatical analysis pipline associated with "Epitranscriptomic maps of 5-methylcytosine reveal substrate diversity of NSUN methyltransferases and links to mRNA translation and turnover"

    YangLab/Epitranscriptomic-maps-of-5-methylcytosine’s past year of commit activity
    Shell 0 0 0 0 Updated Dec 29, 2023
  • CFBI Public

    CFBI is custom Perl and Shell scripts for base substitution and indel frequencies calculation.

    YangLab/CFBI’s past year of commit activity
    Perl 3 MIT 1 0 0 Updated Oct 8, 2023
  • RADAR Public

    RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.

    YangLab/RADAR’s past year of commit activity
    Perl 17 GPL-3.0 8 3 0 Updated Oct 8, 2023
  • BEIDOU Public

    Base/Prime Editor Induced DNA Off-target site identification Unified toolkit

    YangLab/BEIDOU’s past year of commit activity
    Shell 6 2 0 0 Updated Oct 8, 2023
  • BEable_circRNA_methods Public
    YangLab/BEable_circRNA_methods’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated May 31, 2023
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