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Update QQ plot docs
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aherbert committed Aug 10, 2023
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Expand Up @@ -1712,7 +1712,7 @@ When the plugin runs a dialog is presented that allows multiple datasets to be s
- Random seed for the bootstrap repeats (hexidecimal input).

* - Show QQ plot
- Display a quantile-quantile plot of the model against the data distribution. The quantile for the model is taken using the cumulative probability of the data as k / (n + 1).
- Display a quantile-quantile plot of the model against the data distribution. The quantile for the model is taken using the cumulative probability of the data as (k - 1/3) / (n + 1/3).

The analysis extracts the tracks and filters them to stationary molecules. A histogram of residence times is created and fit using the exponential model (see :numref:`Figure %s <fig_residence_time_analysis_histogram>`). Fit progress is recorded in the ``ImageJ`` log window. Bootstrapping is optionally used on the data to produce a 95% confidence interval for the fit parameters.

Expand Down Expand Up @@ -1821,7 +1821,7 @@ The following parameters can be set:
- Random seed for the bootstrap repeats (hexidecimal input).

* - Show QQ plot
- Display a quantile-quantile plot of the model against the data distribution. The quantile for the model is taken using the cumulative probability of the data as k / (n + 1).
- Display a quantile-quantile plot of the model against the data distribution. The quantile for the model is taken using the cumulative probability of the data as (k - 1/3) / (n + 1/3).

The simulation allows experimenting with the exposure time and number of samples required to obtain satisfactory results for the populations of bound molecules.

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