Migrate tests to bioio #80
Workflow file for this run
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| name: build | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.10"] | |
| steps: | |
| - name: Checkout the repo | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install poetry | |
| uses: snok/install-poetry@v1 | |
| with: | |
| virtualenvs-create: true | |
| virtualenvs-in-project: true | |
| - name: Load cached venv | |
| id: cached-poetry-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: .venv | |
| key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }} | |
| - name: Install dependencies | |
| if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
| run: | | |
| poetry install --no-interaction --no-root | |
| - name: Install library | |
| run: | | |
| poetry install --no-interaction | |
| - name: Test with pytest | |
| run: | | |
| source .venv/bin/activate | |
| pytest --cov-report html --cov=src/ tests/ | |
| rm htmlcov/.gitignore | |
| - name: Publish coverage report | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.10' }} | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: htmlcov | |
| target-folder: _coverage | |
| - name: Extract coverage percent | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.10' }} | |
| run: | | |
| echo "COVERAGE=$(grep -oP 'pc_cov">\K([0-9]+)' htmlcov/index.html)" >> $GITHUB_ENV | |
| - name: Generate coverage badge | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.10' }} | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/coverage.svg | |
| label: coverage | |
| value: ${{ env.COVERAGE }} | |
| value_format: "%d%%" | |
| anybadge_args: 50=red 60=orange 80=yellow 100=green | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Publish badge | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.10' }} | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_badges | |
| target-folder: _badges | |
| clean: false | |
| result: | |
| if: ${{ always() }} | |
| runs-on: ubuntu-latest | |
| needs: [build] | |
| steps: | |
| - name: Checkout the repo | |
| uses: actions/checkout@v3 | |
| - name: Get build result | |
| run: | | |
| if [[ ${{ needs.build.result }} == "success" || ${{ needs.build.result }} == "skipped" ]]; then | |
| exit 0 | |
| else | |
| exit 1 | |
| fi | |
| - name: Generate passing badge | |
| if: success() | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/build.svg | |
| label: build | |
| value: passing | |
| color: green | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Generate failing badge | |
| if: failure() | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/build.svg | |
| label: build | |
| value: failing | |
| color: red | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Publish badge | |
| if: success() || failure() | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_badges | |
| target-folder: _badges | |
| clean: false |