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ameske/csvtoprism
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csvtoprism takes a CSV representation of the results from an assay and converts them to a format for Prism 6. # Input Format csvtoprism does not expect a rigid input format file. Rather it looks for 8 data lines and 8 identifier lines. A data line has the following structure, where "A" - "H" represents the literal string "A" - "H" and Data Point is an integer. ``` <["A"-"H"]>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point>,<Data Point> ``` An identifier line has the following structure. There may be empty "cells" in the line. csvtoprism will discard those and grab the first 4 non-empty strings. ``` <["A"-"H"]>,<Identifier>,<Identifier>,<Identifier>,<Identifier> ``` # Output Format Prism 6 takes in data in column format, where the identifiers are on the top row and the data associated with the identifiers are in columns.
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Converts CSV formatted assay data into a CSV format suitable for Prism 6 import
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