Fix URLs (JuliaHEP#159)

aminnj · Jun 23, 2022 · 4df552e · 4df552e
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diff --git a/README.md b/README.md
@@ -3,14 +3,14 @@
 <!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
 [![All Contributors](https://img.shields.io/badge/all_contributors-7-orange.svg?style=flat-square)](#contributors-)
 <!-- ALL-CONTRIBUTORS-BADGE:END -->
-[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://tamasgal.github.io/UnROOT.jl/dev)
-[![Build Status](https://github.com/tamasgal/UnROOT.jl/workflows/CI/badge.svg)](https://github.com/tamasgal/UnROOT.jl/actions)
-[![Codecov](https://codecov.io/gh/tamasgal/UnROOT.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/tamasgal/UnROOT.jl)
+[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://juliahep.github.io/UnROOT.jl/dev)
+[![Build Status](https://github.com/JuliaHEP/UnROOT.jl/workflows/CI/badge.svg)](https://github.com/JuliaHEP/UnROOT.jl/actions)
+[![Codecov](https://codecov.io/gh/JuliaHEP/UnROOT.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/JuliaHEP/UnROOT.jl)
 
 UnROOT.jl is a reader for the [CERN ROOT](https://root.cern) file format
 written entirely in Julia, without any dependence on ROOT or Python.
 
-## Quick Start (see [docs](https://tamasgal.github.io/UnROOT.jl/dev/) for more)
+## Quick Start (see [docs](https://JuliaHEP.github.io/UnROOT.jl/dev/) for more)
 ```julia
 julia> using UnROOT
 
@@ -69,7 +69,7 @@ ROOTFile with 1 entry and 19 streamers.
 ## Branch of custom struct
 
 We provide an experimental interface for hooking up UnROOT with your custom types
-that only takes 2 steps, as explained [in the docs](https://tamasgal.github.io/UnROOT.jl/dev/advanced/custom_branch/).
+that only takes 2 steps, as explained [in the docs](https://JuliaHEP.github.io/UnROOT.jl/dev/advanced/custom_branch/).
 As a show case for this functionality, the `TLorentzVector` support in UnROOT is implemented
 with the said plug-in system.
 
@@ -202,10 +202,10 @@ Thanks goes to these wonderful people ([emoji key](https://allcontributors.org/d
 <!-- markdownlint-disable -->
 <table>
   <tr>
-    <td align="center"><a href="http://www.tamasgal.com"><img src="https://avatars.githubusercontent.com/u/1730350?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Tamas Gal</b></sub></a><br /><a href="https://github.com/tamasgal/UnROOT.jl/commits?author=tamasgal" title="Code">💻</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=tamasgal" title="Documentation">📖</a> <a href="#infra-tamasgal" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#data-tamasgal" title="Data">🔣</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=tamasgal" title="Tests">⚠️</a></td>
-    <td align="center"><a href="https://github.com/Moelf"><img src="https://avatars.githubusercontent.com/u/5306213?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Jerry Ling</b></sub></a><br /><a href="https://github.com/tamasgal/UnROOT.jl/commits?author=Moelf" title="Code">💻</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=Moelf" title="Tests">⚠️</a> <a href="#data-Moelf" title="Data">🔣</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=Moelf" title="Documentation">📖</a></td>
-    <td align="center"><a href="https://github.com/8me"><img src="https://avatars.githubusercontent.com/u/17862090?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Johannes Schumann</b></sub></a><br /><a href="https://github.com/tamasgal/UnROOT.jl/commits?author=8me" title="Code">💻</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=8me" title="Tests">⚠️</a> <a href="#data-8me" title="Data">🔣</a></td>
-    <td align="center"><a href="https://github.com/aminnj"><img src="https://avatars.githubusercontent.com/u/5760027?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Nick Amin</b></sub></a><br /><a href="https://github.com/tamasgal/UnROOT.jl/commits?author=aminnj" title="Code">💻</a> <a href="https://github.com/tamasgal/UnROOT.jl/commits?author=aminnj" title="Tests">⚠️</a> <a href="#data-aminnj" title="Data">🔣</a></td>
+    <td align="center"><a href="http://www.tamasgal.com"><img src="https://avatars.githubusercontent.com/u/1730350?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Tamas Gal</b></sub></a><br /><a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=tamasgal" title="Code">💻</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=tamasgal" title="Documentation">📖</a> <a href="#infra-tamasgal" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a> <a href="#data-tamasgal" title="Data">🔣</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=tamasgal" title="Tests">⚠️</a></td>
+    <td align="center"><a href="https://github.com/Moelf"><img src="https://avatars.githubusercontent.com/u/5306213?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Jerry Ling</b></sub></a><br /><a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=Moelf" title="Code">💻</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=Moelf" title="Tests">⚠️</a> <a href="#data-Moelf" title="Data">🔣</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=Moelf" title="Documentation">📖</a></td>
+    <td align="center"><a href="https://github.com/8me"><img src="https://avatars.githubusercontent.com/u/17862090?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Johannes Schumann</b></sub></a><br /><a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=8me" title="Code">💻</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=8me" title="Tests">⚠️</a> <a href="#data-8me" title="Data">🔣</a></td>
+    <td align="center"><a href="https://github.com/aminnj"><img src="https://avatars.githubusercontent.com/u/5760027?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Nick Amin</b></sub></a><br /><a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=aminnj" title="Code">💻</a> <a href="https://github.com/JuliaHEP/UnROOT.jl/commits?author=aminnj" title="Tests">⚠️</a> <a href="#data-aminnj" title="Data">🔣</a></td>
     <td align="center"><a href="https://giordano.github.io"><img src="https://avatars.githubusercontent.com/u/765740?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Mosè Giordano</b></sub></a><br /><a href="#infra-giordano" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td>
     <td align="center"><a href="https://github.com/oschulz"><img src="https://avatars.githubusercontent.com/u/546147?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Oliver Schulz</b></sub></a><br /><a href="#ideas-oschulz" title="Ideas, Planning, & Feedback">🤔</a></td>
     <td align="center"><a href="https://github.com/mmikhasenko"><img src="https://avatars.githubusercontent.com/u/22725744?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Misha Mikhasenko</b></sub></a><br /><a href="#data-mmikhasenko" title="Data">🔣</a></td>

diff --git a/docs/make.jl b/docs/make.jl
@@ -17,7 +17,7 @@ makedocs(;
         "For Contributors" => "devdocs.md",
         "APIs" => "internalapis.md",
     ],
-    repo="https://github.com/tamasgal/UnROOT.jl/blob/{commit}{path}#L{line}",
+    repo="https://github.com/JuliaHEP/UnROOT.jl/blob/{commit}{path}#L{line}",
     sitename="UnROOT.jl",
     authors="Tamas Gal and contributors",
 )

diff --git a/docs/src/advanced/custom_branch.md b/docs/src/advanced/custom_branch.md
@@ -3,17 +3,17 @@ It is possible to parse Branches with custom structure as long as you know how t
 As an example, the `TLorentzVector` is added using this mechanism and we will walk through the steps needed:
 
 ### 1. Provide a map between `fClassName` of your struct (as seen in .root) to a Julia type.
-Pass a `Dict{String, Type}` to `ROOTFile(filepath; customstructs)`. The `TLorentzVector` is shipped [by default](https://github.com/tamasgal/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L21):
+Pass a `Dict{String, Type}` to `ROOTFile(filepath; customstructs)`. The `TLorentzVector` is shipped [by default](https://github.com/JuliaHEP/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L21):
 ```julia
 ROOTFile(filepath; customstructs = Dict("TLorentzVector" => LorentzVector{Float64}))
 ```
 
-This `Dict` will subsequently be used by the `auto_T_JaggT` function [at here](https://github.com/tamasgal/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L213-L222) such that when we encounter a branch with this `fClassName`, we will return your `Type` as the detected element type of this branch.
+This `Dict` will subsequently be used by the `auto_T_JaggT` function [at here](https://github.com/JuliaHEP/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L213-L222) such that when we encounter a branch with this `fClassName`, we will return your `Type` as the detected element type of this branch.
 
 ### 2. Extend the raw bytes interpreting function `UnROOT.interped_data`
-By default, given a branch element type and a "jaggness" type, a general function [is defined](https://github.com/tamasgal/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L149) which will try to parse the raw bytes into Julia data structure. The `::Type{T}` will match what you have provided in the `Dict` in the previous step.
+By default, given a branch element type and a "jaggness" type, a general function [is defined](https://github.com/JuliaHEP/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/root.jl#L149) which will try to parse the raw bytes into Julia data structure. The `::Type{T}` will match what you have provided in the `Dict` in the previous step.
 
-Thus, to "teach" UnROOT how to interpret bytes for your type `T`, you would want to defined a more specific `UnROOT.interped_data` than the default one. Taking the `TLorentzVector` [as example](https://github.com/tamasgal/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/custom.jl#L23) again, we define a function:
+Thus, to "teach" UnROOT how to interpret bytes for your type `T`, you would want to defined a more specific `UnROOT.interped_data` than the default one. Taking the `TLorentzVector` [as example](https://github.com/JuliaHEP/UnROOT.jl/blob/06b692523bbff3f467f6b7fe3544e411a719bc9e/src/custom.jl#L23) again, we define a function:
 ```julia
 using LorentzVector
 const LVF64 = LorentzVector{Float64}
@@ -32,7 +32,7 @@ function Base.reinterpret(::Type{LVF64}, v::AbstractVector{UInt8}) where T
 end
 ```
 
-The `Base.reinterpret` function is just a helper function, you could instead write everything inside `UnROOT.interped_data`. We then builds on these, to interpret Jagged TLV branch: https://github.com/tamasgal/UnROOT.jl/blob/4747f6f5fd97ed1a872765485b4eb9e99ec5a650/src/custom.jl#L47
+The `Base.reinterpret` function is just a helper function, you could instead write everything inside `UnROOT.interped_data`. We then builds on these, to interpret Jagged TLV branch: https://github.com/JuliaHEP/UnROOT.jl/blob/4747f6f5fd97ed1a872765485b4eb9e99ec5a650/src/custom.jl#L47
 
 ### More details
 To expand a bit what we're doing here, the `rawdata` for a single `TLV` is always `64 bytes` long and the first `32 bytes` are TObject header which we don't care (which is why we don't care about `rawoffsets` here). The last `32 bytes` make up 4 `Float64` and we simply parse them and return a collection of (julia) `LorentzVector{Float64}`.

diff --git a/test/samples/issue61.py b/test/samples/issue61.py
@@ -1,6 +1,6 @@
 import ROOT as r
 
-# https://github.com/tamasgal/UnROOT.jl/issues/61
+# https://github.com/JuliaHEP/UnROOT.jl/issues/61
 # needs to be run in a specific environment to trigger the issue
 # in the first place