Skip to content

Commit

Permalink
Prep for 1.7.0 release (a-r-j#292)
Browse files Browse the repository at this point in the history
* update version string

* update readme

* update doc version

* update changelog
  • Loading branch information
a-r-j authored and amorehead committed Apr 18, 2023
1 parent 5d7dd0b commit 75c7b88
Show file tree
Hide file tree
Showing 4 changed files with 18 additions and 16 deletions.
2 changes: 1 addition & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
### 1.6.1 - UNRELEASED
### 1.7.0 - UNRELEASED

#### New Features

Expand Down
28 changes: 15 additions & 13 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -32,19 +32,21 @@ This package provides functionality for producing geometric representations of p

## What's New?

| | |
|---|---|
| [Protein Tensor Module](http://graphein.ai/notebooks/protein_tensors.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/protein_tensors.ipynb) |
| [Constructing molecular graphs](http://graphein.ai/notebooks/molecule_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/molecule_tutorial.ipynb) |
| [Ready-to-go Dataloaders for PyTorch Geometric](http://graphein.ai/notebooks/dataloader_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/dataloader_tutorial.ipynb) |
| [Extracting subgraphs from protein graphs](http://graphein.ai/notebooks/subgraphing_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/subgraphing_tutorial.ipynb) |
| [Protein Graph Analytics](http://graphein.ai/notebooks/protein_graph_analytics.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/protein_graph_analytics.ipynb) |
| [Graphein CLI](http://graphein.ai/getting_started/usage.html) | |
| [Protein Graph Creation from AlphaFold2!](http://graphein.ai/notebooks/alphafold_protein_graph_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/residue_graphs.ipynb) |
| [Protein Graph Visualisation!](http://graphein.ai/notebooks/interactive_plotly_example.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/interactive_plotly_example.ipynb)
| [RNA Graph Construction from Dotbracket notation](http://graphein.ai/modules/graphein.rna.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/rna_graph_tutorial.ipynb) |
| [Protein - Protein Interaction Network Support & Structural Interactomics (Using AlphaFold2!)](http://graphein.ai/notebooks/ppi_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/ppi_graph.ipynb) |
| [High and Low-level API for massive flexibility - create your own bespoke workflows!](http://graphein.ai/notebooks/residue_graphs.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/residue_graphs.ipynb) |
| | | |
|---|---|---|
| 1.7.0 | [FoldComp Datasets](http://graphein.ai/notebooks/foldcomp.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/foldcomp.ipynb) |
| 1.7.0 | [Creating Datasets from the PDB](http://graphein.ai/notebooks/creating_datasets_from_the_pdb.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/creating_datasets_from_the_pdb.ipynb) |
| 1.6.0 | [Protein Tensor Module](http://graphein.ai/notebooks/protein_tensors.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/protein_tensors.ipynb) |
| 1.5.0 | [Protein Graph Creation from AlphaFold2!](http://graphein.ai/notebooks/alphafold_protein_graph_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/residue_graphs.ipynb) |
| 1.5.0 | [RNA Graph Construction from Dotbracket notation](http://graphein.ai/modules/graphein.rna.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/rna_graph_tutorial.ipynb) |
| 1.4.0 | [Constructing molecular graphs](http://graphein.ai/notebooks/molecule_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/molecule_tutorial.ipynb) |
| 1.3.0 | [Ready-to-go Dataloaders for PyTorch Geometric](http://graphein.ai/notebooks/dataloader_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/dataloader_tutorial.ipynb) |
| 1.2.0 | [Extracting subgraphs from protein graphs](http://graphein.ai/notebooks/subgraphing_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/subgraphing_tutorial.ipynb) |
| 1.2.0 | [Protein Graph Analytics](http://graphein.ai/notebooks/protein_graph_analytics.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/protein_graph_analytics.ipynb) |
| 1.2.0 | [Graphein CLI](http://graphein.ai/getting_started/usage.html) | |
| 1.2.0 |[Protein Graph Visualisation!](http://graphein.ai/notebooks/interactive_plotly_example.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/interactive_plotly_example.ipynb)
| 1.1.0 | [Protein - Protein Interaction Network Support & Structural Interactomics (Using AlphaFold2!)](http://graphein.ai/notebooks/ppi_tutorial.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/ppi_graph.ipynb) |
| 1.0.0 | [High and Low-level API for massive flexibility - create your own bespoke workflows!](http://graphein.ai/notebooks/residue_graphs.html) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/a-r-j/graphein/blob/master/notebooks/residue_graphs.ipynb) |

## Example usage

Expand Down
2 changes: 1 addition & 1 deletion docs/source/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,7 @@
copyright = f"{datetime.datetime.now().year}, {author}"

# The full version, including alpha/beta/rc tags
release = "1.6.0dev"
release = "1.7.0"


# -- General configuration ---------------------------------------------------
Expand Down
2 changes: 1 addition & 1 deletion graphein/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@
from .testing import *

__author__ = "Arian Jamasb <arian@jamasb.io>"
__version__ = "1.6.0"
__version__ = "1.7.0"


logger.configure(
Expand Down

0 comments on commit 75c7b88

Please sign in to comment.