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This repository made for certification course BIOINFORMATICS FOR BIOLOGISTS: ANALYSING AND INTERPRETING GENOMICS DATASETS by WELLCOME CONNECTING SCIENCE.

In this cousre i learned about:

  • Next Generation Sequencing and its significance in genomics,
  • the installation of widely-used bioinformatics tools,
  • the use of different file formats
  • Linux commands for sequence quality control, mapping, and variant calling.
  • The analysis was also performed using the workflow management system Nextflow and applied to viralrecon, an existing bioinformatics pipeline.
  • Downstream analysis included RStudio data visualization of variants obtained from genomic data sample.

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Analyzing variant calling data

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