Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Port / Add Documentation for VarianceSample and VariancePopulation #12742

Merged
merged 1 commit into from
Oct 7, 2024

Conversation

alamb
Copy link
Contributor

@alamb alamb commented Oct 3, 2024

Draft as it builds on #12747

Which issue does this PR close?

Part of #12740

Rationale for this change

Automatically generating documentation has several benefits as listed on #12740

What changes are included in this PR?

  1. Port documentation

Are these changes tested?

Are there any user-facing changes?

@github-actions github-actions bot added documentation Improvements or additions to documentation development-process Related to development process of DataFusion logical-expr Logical plan and expressions core Core DataFusion crate functions labels Oct 3, 2024
@alamb alamb changed the title Alamb/port var pop Port / Add Documentation for VarianceSample and VariancePopulation Oct 3, 2024
@alamb alamb force-pushed the alamb/port_var_pop branch 2 times, most recently from 530412f to c61c09c Compare October 3, 2024 16:46
@github-actions github-actions bot removed development-process Related to development process of DataFusion core Core DataFusion crate labels Oct 3, 2024
@alamb
Copy link
Contributor Author

alamb commented Oct 3, 2024

I also used this PR as a way to double check the new CI check works -- here is an example of it failing: https://github.com/apache/datafusion/actions/runs/11166713917/job/31041794120?pr=12742

@alamb alamb marked this pull request as ready for review October 5, 2024 10:15
Copy link
Contributor

@comphead comphead left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

lgtm, thanks @alamb
@Omega359 I'm thinking if we can build the same doc from using rustdoc or rust attributes 🤔

@Omega359
Copy link
Contributor

Omega359 commented Oct 6, 2024

@Omega359 I'm thinking if we can build the same doc from using rustdoc or rust attributes 🤔

Absolutely we could, and I actually toyed with rustdoc approach at first. My main concern with that is that I envision this is useful outside of just the website documentation and for that I would believe we want the docs to be as easily accessible as possible. I can't think of more accessible ways to provide end-user type documentation than via api. It does mean of course that unless a way is found to incorporate this into the rustdoc it wouldn't show up in docs.rs which I admit is unfortunate.

@alamb
Copy link
Contributor Author

alamb commented Oct 7, 2024

@Omega359 I'm thinking if we can build the same doc from using rustdoc or rust attributes 🤔

Absolutely we could, and I actually toyed with rustdoc approach at first. My main concern with that is that I envision this is useful outside of just the website documentation and for that I would believe we want the docs to be as easily accessible as possible. I can't think of more accessible ways to provide end-user type documentation than via api. It does mean of course that unless a way is found to incorporate this into the rustdoc it wouldn't show up in docs.rs which I admit is unfortunate.

Maybe we can add something to the rust docs (via macro or something) that points do the website version.

Or we could perhaps make a similar script that would update the inlined rust documentation too (that might be getting too fancy 🤔 )

@alamb alamb merged commit b3bf3af into apache:main Oct 7, 2024
25 of 26 checks passed
@alamb
Copy link
Contributor Author

alamb commented Oct 7, 2024

Thank you for the review @comphead

@alamb alamb deleted the alamb/port_var_pop branch October 7, 2024 10:41
alamb added a commit that referenced this pull request Oct 8, 2024
* Add support for external tables with qualified names (#12645)

* Make  support schemas

* Set default name to table

* Remove print statements and stale comment

* Add tests for create table

* Fix typo

* Update datafusion/sql/src/statement.rs

Co-authored-by: Jonah Gao <jonahgao@msn.com>

* convert create_external_table to objectname

* Add sqllogic tests

* Fix failing tests

---------

Co-authored-by: Jonah Gao <jonahgao@msn.com>

* Fix Regex signature types (#12690)

* Fix Regex signature types

* Uncomment the shared tests in string_query.slt.part and removed tests copies everywhere else

* Test `LIKE` and `MATCH` with flags; Remove new tests from regexp.slt

* Refactor `ByteGroupValueBuilder` to use `MaybeNullBufferBuilder` (#12681)

* Fix malformed hex string literal in docs (#12708)

* Simplify match patterns in coercion rules (#12711)

Remove conditions where unnecessary.
Refactor to improve readability.

* Remove aggregate functions dependency on frontend (#12715)

* Remove aggregate functions dependency on frontend

DataFusion is a SQL query engine and also a reusable library for
building query engines. The core functionality should not depend on
frontend related functionalities like `sqlparser` or `datafusion-sql`.

* Remove duplicate license header

* Minor: Remove clone in `transform_to_states` (#12707)

* rm clone

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fmt

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

---------

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* Refactor tests for union sorting properties, add tests for unions and constants (#12702)

* Refactor tests for union sorting properties

* update doc test

* Undo import reordering

* remove unecessary static lifetimes

* Fix: support Qualified Wildcard in count aggregate function (#12673)

* Reduce code duplication in `PrimitiveGroupValueBuilder` with const generics (#12703)

* Reduce code duplication in `PrimitiveGroupValueBuilder` with const generics

* Fix docs

* Disallow duplicated qualified field names (#12608)

* Disallow duplicated qualified field names

* Fix tests

* Optimize base64/hex decoding by pre-allocating output buffers (~2x faster) (#12675)

* add bench

* replace macro with generic function

* remove duplicated code

* optimize base64/hex decode

* Allow DynamicFileCatalog support to query partitioned file (#12683)

* support to query partitioned table for dynamic file catalog

* cargo clippy

* split partitions inferring to another function

* Support `LIMIT` Push-down logical plan optimization for `Extension` nodes (#12685)

* Update trait `UserDefinedLogicalNodeCore`

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Update corresponding interface

Signed-off-by: Austin Liu <austin362667@gmail.com>

Add rewrite rule for `push-down-limit` for `Extension`

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add rewrite rule for `push-down-limit` for `Extension` and tests

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Update corresponding interface

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Reorganize to match guard

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Clena up

Signed-off-by: Austin Liu <austin362667@gmail.com>

Clean up

Signed-off-by: Austin Liu <austin362667@gmail.com>

---------

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Fix AvroReader: Add union resolving for nested struct arrays (#12686)

* Add union resolving for nested struct arrays

* Add test

* Change test

* Reproduce index error

* fmt

---------

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* Adds macros for creating `WindowUDF` and `WindowFunction` expression (#12693)

* Adds macro for udwf singleton

* Adds a doc comment parameter to macro

* Add doc comment for `create_udwf` macro

* Uses default constructor

* Update `Cargo.lock` in `datafusion-cli`

* Fixes: expand `$FN_NAME` in doc strings

* Adds example for macro usage

* Renames macro

* Improve doc comments

* Rename udwf macro

* Minor: doc copy edits

* Adds macro for creating fluent-style expression API

* Adds support for 1 or more parameters in expression function

* Rewrite doc comments

* Rename parameters

* Minor: formatting

* Adds doc comment for `create_udwf_expr` macro

* Improve example docs

* Hides extraneous code in doc comments

* Add a one-line readme

* Adds doc test assertions + minor formatting fixes

* Adds common macro for defining user-defined window functions

* Adds doc comment for `define_udwf_and_expr`

* Defines `RowNumber` using common macro

* Add usage example for common macro

* Adds usage for custom constructor

* Add examples for remaining patterns

* Improve doc comments for usage examples

* Rewrite inner line docs

* Rewrite `create_udwf_expr!` doc comments

* Minor doc improvements

* Fix doc test and usage example

* Add inline comments for macro patterns

* Minor: change doc comment in example

* Support unparsing plans with both Aggregation and Window functions (#12705)

* Support unparsing plans with both Aggregation and Window functions (#35)

* Fix unparsing for aggregation grouping sets

* Add test for grouping set unparsing

* Update datafusion/sql/src/unparser/utils.rs

Co-authored-by: Jax Liu <liugs963@gmail.com>

* Update datafusion/sql/src/unparser/utils.rs

Co-authored-by: Jax Liu <liugs963@gmail.com>

* Update

* More tests

---------

Co-authored-by: Jax Liu <liugs963@gmail.com>

* Fix strpos invocation with dictionary and null (#12712)

In 1b3608d `strpos` signature was
modified to indicate it supports dictionary as input argument, but the
invoke method doesn't support them.

* docs: Update DataFusion introduction to clarify that DataFusion does provide an "out of the box" query engine (#12666)

* Update DataFusion introduction to show that DataFusion offers packaged versions for end users

* change order

* Update README.md

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* refine wording and update user guide for consistency

* prettier

---------

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* Framework for generating function docs from embedded code documentation (#12668)

* Initial work on #12432 to allow for generation of udf docs from embedded documentation in the code

* Add missing license header.

* Fixed examples.

* Fixing a really weird RustRover/wsl ... something. No clue what happened there.

* permission change

* Cargo fmt update.

* Refactored Documentation to allow it to be used in a const.

* Add documentation for syntax_example

* Refactoring Documentation based on PR feedback.

* Cargo fmt update.

* Doc update

* Fixed copy/paste error.

* Minor text updates.

---------

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* Add IMDB(JOB) Benchmark [2/N] (imdb queries) (#12529)

* imdb dataset

* cargo fmt

* Add 113 queries for IMDB(JOB)

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add `get_query_sql` from `query_id` string

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Fix CSV reader & Remove Parquet partition

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add benchmark IMDB runner

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add `run_imdb` script

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add checker for imdb option

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add SLT for IMDB

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Fix `get_query_sql()` for CI roundtrip test

Signed-off-by: Austin Liu <austin362667@gmail.com>

Fix `get_query_sql()` for CI roundtrip test

Signed-off-by: Austin Liu <austin362667@gmail.com>

Fix `get_query_sql()` for CI roundtrip test

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Clean up

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add missing license

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add IMDB(JOB) queries `2b` to `5c`

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Add `INCLUDE_IMDB` in CI verify-benchmark-results

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Prepare IMDB dataset

Signed-off-by: Austin Liu <austin362667@gmail.com>

Prepare IMDB dataset

Signed-off-by: Austin Liu <austin362667@gmail.com>

* use uint as id type

* format

* Seperate `tpch` and `imdb` benchmarking CI jobs

Signed-off-by: Austin Liu <austin362667@gmail.com>

Fix path

Signed-off-by: Austin Liu <austin362667@gmail.com>

Fix path

Signed-off-by: Austin Liu <austin362667@gmail.com>

Remove `tpch` in `imdb` benchmark

Signed-off-by: Austin Liu <austin362667@gmail.com>

* Remove IMDB(JOB) slt in CI

Signed-off-by: Austin Liu <austin362667@gmail.com>

Remove IMDB(JOB) slt in CI

Signed-off-by: Austin Liu <austin362667@gmail.com>

---------

Signed-off-by: Austin Liu <austin362667@gmail.com>
Co-authored-by: DouPache <douenergy@gmail.com>

* Minor: avoid clone while calculating union equivalence properties (#12722)

* Minor: avoid clone while calculating union equivalence properties

* Update datafusion/physical-expr/src/equivalence/properties.rs

* fmt

* Simplify streaming_merge function parameters (#12719)

* simplify streaming_merge function parameters

* revert test change

* change StreamingMergeConfig into builder pattern

* Fix links on docs index page (#12750)

* Provide field and schema metadata missing on cross joins, and union with null fields. (#12729)

* test: reproducer for missing schema metadata on cross join

* fix: pass thru schema metadata on cross join

* fix: preserve metadata when transforming to view types

* test: reproducer for missing field metadata in left hand NULL field of union

* fix: preserve field metadata from right side of union

* chore: safe indexing

* Minor: Update string tests for strpos (#12739)

* Apply `type_union_resolution` to array and values (#12753)

* cleanup make array coercion rule

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* change to type union resolution

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* change value too

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix tpyo

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

---------

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* Add `DocumentationBuilder::with_standard_argument` to reduce copy/paste (#12747)

* Add `DocumentationBuilder::with_standard_expression` to reduce copy/paste

* fix doc

* fix standard argument

* Update docs

* Improve documentation to explain what is different

* fix `equal_to` in `PrimitiveGroupValueBuilder` (#12758)

* fix `equal_to` in `PrimitiveGroupValueBuilder`.

* fix typo.

* add uts.

* reduce calling of `is_null`.

* Minor: doc how field name is to be set (#12757)

* Fix `equal_to` in `ByteGroupValueBuilder` (#12770)

* Fix `equal_to` in `ByteGroupValueBuilder`

* refactor null_equal_to

* Update datafusion/physical-plan/src/aggregates/group_values/group_column.rs

* Allow simplification even when nullable (#12746)

The nullable requirement seem to have been added in #1401 but as far as
I can tell they are not needed for these 2 cases.

I think this can be shown using this truth table: (generated using
datafusion-cli without this patch)
```
> CREATE TABLE t (v BOOLEAN) as values (true), (false), (NULL);
> select t.v, t2.v, t.v AND (t.v OR t2.v), t.v OR (t.v AND t2.v) from t cross join t as t2;
+-------+-------+---------------------+---------------------+
| v     | v     | t.v AND t.v OR t2.v | t.v OR t.v AND t2.v |
+-------+-------+---------------------+---------------------+
| true  | true  | true                | true                |
| true  | false | true                | true                |
| true  |       | true                | true                |
| false | true  | false               | false               |
| false | false | false               | false               |
| false |       | false               | false               |
|       | true  |                     |                     |
|       | false |                     |                     |
|       |       |                     |                     |
+-------+-------+---------------------+---------------------+
```

And it seems Spark applies both of these and DuckDB applies only the
first one.

* Fix unnest conjunction with selecting wildcard expression (#12760)

* fix unnest statement with wildcard expression

* add commnets

* Improve `round` scalar function unparsing for Postgres (#12744)

* Postgres: enforce required `NUMERIC` type for `round` scalar function (#34)

Includes initial support for dialects to override scalar functions unparsing

* Document scalar_function_to_sql_overrides fn

* Fix stack overflow calculating projected orderings (#12759)

* Fix stack overflow calculating projected orderings

* fix docs

* Port / Add Documentation for `VarianceSample` and `VariancePopulation` (#12742)

* Upgrade arrow/parquet to `53.1.0` / fix clippy (#12724)

* Update to arrow/parquet 53.1.0

* Update some API

* update for changed file sizes

* Use non deprecated APIs

* Use ParquetMetadataReader from @etseidl

* remove upstreamed implementation

* Update CSV schema

* Use upstream is_null and is_not_null kernels

* feat: add support for Substrait ExtendedExpression (#12728)

* Add support for serializing and deserializing Substrait ExtendedExpr message

* Address clippy reviews

* Reuse existing rename method

* Transformed::new_transformed: Fix documentation formatting (#12787)

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* fix: Correct results for grouping sets when columns contain nulls (#12571)

* Fix grouping sets behavior when data contains nulls

* PR suggestion comment

* Update new test case

* Add grouping_id to the logical plan

* Add doc comment next to INTERNAL_GROUPING_ID

* Fix unparsing of Aggregate with grouping sets

---------

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* Migrate documentation for all string functions from scalar_functions.md to code  (#12775)

* Added documentation for string and unicode functions.

* Fixed issues with aliases.

* Cargo fmt.

* Minor doc fixes.

* Update docs for var_pop/samp

---------

Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>

* Account for constant equivalence properties in union, tests (#12562)

* Minor: clarify comment about empty dependencies (#12786)

* Introduce Signature::String and return error if  input of `strpos` is integer (#12751)

* fix sig

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix error

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix all signature

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix all signature

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* change default type

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* clippy

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* fix docs

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* rm deadcode

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* cleanup

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* cleanup

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* rm test

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

---------

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>

* Minor: improve docs on MovingMin/MovingMax (#12790)

* Add slt tests (#12721)

---------

Signed-off-by: jayzhan211 <jayzhan211@gmail.com>
Signed-off-by: Austin Liu <austin362667@gmail.com>
Co-authored-by: OussamaSaoudi <45303303+OussamaSaoudi@users.noreply.github.com>
Co-authored-by: Jonah Gao <jonahgao@msn.com>
Co-authored-by: Dmitrii Blaginin <dmitrii@blaginin.me>
Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org>
Co-authored-by: Tomoaki Kawada <kawada@kmckk.co.jp>
Co-authored-by: Piotr Findeisen <piotr.findeisen@gmail.com>
Co-authored-by: Jay Zhan <jayzhan211@gmail.com>
Co-authored-by: HuSen <husen.xjtu@gmail.com>
Co-authored-by: Emil Ejbyfeldt <emil.ejbyfeldt@gmail.com>
Co-authored-by: Simon Vandel Sillesen <simon.vandel@gmail.com>
Co-authored-by: Jax Liu <liugs963@gmail.com>
Co-authored-by: Austin Liu <austin362667@gmail.com>
Co-authored-by: JonasDev1 <jswipp@googlemail.com>
Co-authored-by: jcsherin <jacob@protoship.io>
Co-authored-by: Sergei Grebnov <sergei.grebnov@gmail.com>
Co-authored-by: Andy Grove <agrove@apache.org>
Co-authored-by: Bruce Ritchie <bruce.ritchie@veeva.com>
Co-authored-by: DouPache <douenergy@gmail.com>
Co-authored-by: mertak-synnada <mertak67+synaada@gmail.com>
Co-authored-by: Bryce Mecum <petridish@gmail.com>
Co-authored-by: wiedld <wiedld@users.noreply.github.com>
Co-authored-by: kamille <caoruiqiu.crq@antgroup.com>
Co-authored-by: Weston Pace <weston.pace@gmail.com>
Co-authored-by: Val Lorentz <vlorentz@softwareheritage.org>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
documentation Improvements or additions to documentation functions logical-expr Logical plan and expressions
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants