[DOCS] Fix spelling and rename file #2879
Workflow file for this run
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name: R build | |
on: | |
push: | |
branches: | |
- master | |
paths: | |
- 'common/**' | |
- 'spark/**' | |
- 'spark-shaded/**' | |
- 'pom.xml' | |
- 'R/**' | |
- '.github/workflows/r.yml' | |
pull_request: | |
branches: | |
- '*' | |
paths: | |
- 'common/**' | |
- 'spark/**' | |
- 'spark-shaded/**' | |
- 'pom.xml' | |
- 'R/**' | |
- '.github/workflows/r.yml' | |
env: | |
MAVEN_OPTS: -Dmaven.wagon.httpconnectionManager.ttlSeconds=60 | |
DO_NOT_TRACK: true | |
jobs: | |
build: | |
runs-on: ubuntu-22.04 | |
strategy: | |
fail-fast: true | |
matrix: | |
spark: [3.0.3, 3.1.2, 3.2.1, 3.3.0, 3.4.0, 3.5.0] | |
hadoop: [3] | |
scala: [2.12.15] | |
r: [oldrel, release] | |
env: | |
SPARK_VERSION: ${{ matrix.spark }} | |
HADOOP_VERSION: ${{ matrix.hadoop }} | |
SCALA_VERSION: ${{ matrix.scala }} | |
# Ensure the temporary auth token for this workflow, instead of the | |
# bundled GitHub PAT from the `remotes` package is used for | |
# `remotes::install_github()` | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- name: Delete existing R binaries | |
run: | | |
for b in R Rscript | |
do | |
while [ -n "$(which "$b")" ] | |
do | |
sudo rm -v "$(which "$b")" | |
done | |
done | |
shell: bash | |
- name: Delete existing JDK installation(s) | |
run: | | |
sudo apt-get -y remove --purge default-jdk adoptopenjdk-11-hotspot || : | |
shell: bash | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-r@v2.10.1 | |
with: | |
r-version: ${{ matrix.r }} | |
use-public-rspm: true | |
- name: Query R dependencies | |
uses: r-lib/actions/setup-r-dependencies@v2.10.1 | |
with: | |
cache: true | |
extra-packages: | | |
any::testthat | |
any::rcmdcheck | |
working-directory : './R' | |
- name: Build and check R package | |
uses: r-lib/actions/check-r-package@v2.10.1 | |
with: | |
build_args: 'c("--no-build-vignettes", "--no-manual")' | |
args: 'c("--no-build-vignettes", "--no-manual", "--no-tests")' | |
error-on: '"error"' | |
working-directory: './R' | |
env: | |
_R_CHECK_FORCE_SUGGESTS_: false | |
- name: Install apache.sedona from source | |
run: Rscript -e 'install.packages("./R/", repos = NULL, type = "source")' | |
- uses: actions/setup-java@v4 | |
with: | |
distribution: 'temurin' | |
java-version: '8' | |
cache: 'maven' | |
- name: Get OS name | |
id: os-name | |
run: | | |
# `os_name` will be like "Ubuntu-20.04.1-LTS" | |
OS_NAME=$(lsb_release -ds | sed 's/\s/-/g') | |
echo "os-name=$OS_NAME" >> $GITHUB_OUTPUT | |
- name: Cache Spark installations | |
if: runner.os != 'Windows' | |
uses: actions/cache@master | |
with: | |
path: ~/spark | |
key: apache.sedona-apache-spark-${{ steps.os-name.outputs.os-name }}-${{ env.SPARK_VERSION }} | |
- name: Build Sedona libraries | |
run: | | |
SPARK_COMPAT_VERSION=${SPARK_VERSION:0:3} | |
mvn -q clean install -DskipTests -Dspark=${SPARK_COMPAT_VERSION} -Dscala=${SCALA_VERSION:0:4} | |
- name: Run tests | |
run: | | |
if [[ "${SPARK_VERSION:0:3}" < "3.3" ]]; then | |
case "$HADOOP_VERSION" in | |
3) | |
export HADOOP_VERSION=3.2 | |
;; | |
2) | |
export HADOOP_VERSION=2.7 | |
;; | |
esac | |
fi | |
export SPARKLYR_LOG_FILE='/tmp/sparklyr.log' | |
source ./.github/workflows/scripts/prepare_sparklyr_sedona_test_env.sh | |
echo "Apache Sedona jar files: ${SEDONA_JAR_FILES}" | |
cd ./R/tests | |
NOT_CRAN='true' Rscript testthat.R | |
shell: bash | |
- uses: actions/upload-artifact@v3 | |
if: failure() | |
with: | |
name: Worker logs | |
path: /tmp/sparklyr.log | |
- name: Dump worker logs on failure | |
if: failure() | |
run: cat /tmp/sparklyr.log |