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Merge pull request #1128 from ekatef/fix_merge #5

Merge pull request #1128 from ekatef/fix_merge

Merge pull request #1128 from ekatef/fix_merge #5

Workflow file for this run

name: CI
on:
push:
branches:
- main
pull_request:
branches:
- main
schedule:
- cron: "0 5 * * TUE"
env:
CACHE_NUMBER: 1 # Change this value to manually reset the environment cache
jobs:
build:
strategy:
fail-fast: false
max-parallel: 3
matrix:
os:
- ubuntu-latest
- macos-latest
# - windows-latest
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Setup micromamba
uses: mamba-org/setup-micromamba@v2
with:
micromamba-version: '1.5.9-1'
environment-file: envs/environment.yaml
log-level: debug
init-shell: bash
cache-environment: true
cache-downloads: true
- name: Set cache dates
run: |
echo "WEEK=$(date +'%Y%U')" >> $GITHUB_ENV
- name: Cache data and cutouts folders
uses: actions/cache@v4
with:
path: |
data
cutouts
key: data-cutouts-${{ env.WEEK }}-${{ env.CACHE_NUMBER }}
- name: Micromamba list
run: micromamba list
- name: Run Test
run: make test
# - name: Test plotting and summaries
# run: |
# snakemake --cores all plot_all_p_nom
# snakemake --cores all plot_all_summaries
# snakemake --cores all make_all_summaries
# rm -rf resources/*.nc resources/*.geojson resources/*.h5 networks results