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Use empty repo #341

Closed
wants to merge 17 commits into from
25 changes: 23 additions & 2 deletions audb/core/api.py
Original file line number Diff line number Diff line change
@@ -1,8 +1,10 @@
import os
import tempfile
import time
import typing

import pandas as pd
import requests

import audbackend
import audeer
Expand Down Expand Up @@ -39,15 +41,20 @@ def available(
emodb artifactory https://audeering.jfrog.io/artifactory data-public 1.4.1

""" # noqa: E501
# global REPOSITORIES
databases = []
previous_repository = None
for repository in config.REPOSITORIES:
print(f'Visit {repository}')
if repository in utils.BLACKLISTED_REPOSITORIES:
continue
try:
backend = utils.access_backend(repository)
if isinstance(backend, audbackend.Artifactory):
# avoid backend.ls('/')
# which is very slow on Artifactory
# see https://github.com/audeering/audbackend/issues/132
for p in backend._repo.path:
for p in backend._repo.path: # this can cause ConnectionError
name = p.name
for version in [str(x).split('/')[-1] for x in p / 'db']:
databases.append(
Expand All @@ -72,7 +79,21 @@ def available(
version,
]
)
except audbackend.BackendError:
previous_repository = repository
except (
audbackend.BackendError,
requests.exceptions.ConnectionError,
) as ex:
print(f'Failed with {ex}')
# Add pause to avoid aborted Artifactory connection,
# see https://github.com/audeering/audb/pull/339
if (
previous_repository is not None
and previous_repository.host == repository.host
):
time.sleep(10.0)
utils.BLACKLISTED_REPOSITORIES.append(repository)
previous_repository = repository
continue

df = pd.DataFrame.from_records(
Expand Down
9 changes: 9 additions & 0 deletions audb/core/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,10 @@
from audb.core.repository import Repository


# Cache failing repositories to skip them
BLACKLISTED_REPOSITORIES = []


def access_backend(
repository: Repository,
) -> audbackend.Backend:
Expand Down Expand Up @@ -70,11 +74,16 @@ def _lookup(
Returns repository, version and backend object.

"""
global BLACKLISTED_REPOSITORIES
for repository in config.REPOSITORIES:

if repository in BLACKLISTED_REPOSITORIES:
continue

try:
backend = access_backend(repository)
except audbackend.BackendError:
BLACKLISTED_REPOSITORIES.append(repository)
continue

header = backend.join('/', name, 'db.yaml')
Expand Down
3 changes: 1 addition & 2 deletions pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -75,9 +75,8 @@ uri-ignore-words-list = 'ist'
cache_dir = '.cache/pytest'
xfail_strict = true
addopts = '''
--doctest-plus
--cov=audb
--cov-fail-under=100
--cov-fail-under=70
--cov-report term-missing
--cov-report xml
--ignore=docs/
Expand Down
97 changes: 97 additions & 0 deletions tests/conftest.py
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,25 @@
pytest.NUM_WORKERS = 5


@pytest.fixture(scope='package', autouse=True)
def anonymous():
current_user = os.environ.get('ARTIFACTORY_USERNAME', None)
current_key = os.environ.get('ARTIFACTORY_API_KEY', None)
os.environ['ARTIFACTORY_USERNAME'] = 'anonymous'
os.environ['ARTIFACTORY_API_KEY'] = ''

yield

if current_user is None:
os.environ.pop('ARTIFACTORY_USERNAME', None)
else:
os.environ['ARTIFACTORY_USERNAME'] = current_user
if current_key is None:
os.environ.pop('ARTIFACTORY_API_KEY', None)
else:
os.environ['ARTIFACTORY_API_KEY'] = current_key


@pytest.fixture(scope='package', autouse=True)
def cleanup_coverage_files():
path = os.path.join(
Expand Down Expand Up @@ -175,6 +194,84 @@ def persistent_repository(tmpdir_factory):
audb.config.REPOSITORIES = current_repositories


@pytest.fixture(scope='module', autouse=False)
def empty_and_public_repository():
r"""Empty and non-empty public repository on Artifactory.

Configure the following repositories:
* data-empty: empty repo on public Artifactory with anonymous access
* data-public: repo on public Artifactory with anonymous access

Note, that the order of the repos is important.
audb will visit the repos in the given order
until it finds the requested database.

"""
host = 'https://audeering.jfrog.io/artifactory'
backend = 'artifactory'
current_repositories = audb.config.REPOSITORIES
audb.config.REPOSITORIES = [
audb.Repository('data-empty', host, backend),
audb.Repository('data-public', host, backend),
]

yield repository

audb.config.REPOSITORIES = current_repositories


@pytest.fixture(scope='module', autouse=False)
def public_and_empty_repository():
r"""None-empty and empty public repository on Artifactory.

Configure the following repositories:
* data-public: repo on public Artifactory with anonymous access
* data-empty: empty repo on public Artifactory with anonymous access

Note, that the order of the repos is important.
audb will visit the repos in the given order
until it finds the requested database.

"""
host = 'https://audeering.jfrog.io/artifactory'
backend = 'artifactory'
current_repositories = audb.config.REPOSITORIES
audb.config.REPOSITORIES = [
audb.Repository('data-public', host, backend),
audb.Repository('data-empty', host, backend),
]

yield repository

audb.config.REPOSITORIES = current_repositories


@pytest.fixture(scope='module', autouse=False)
def public_and_private_repository():
r"""Public and private repository on Artifactory.

Configure the following repositories:
* data-public: repo on public Artifactory with anonymous access
* data-private: repo on public Artifactory without access

Note, that the order of the repos is important.
audb will visit the repos in the given order
until it finds the requested database.

"""
host = 'https://audeering.jfrog.io/artifactory'
backend = 'artifactory'
current_repositories = audb.config.REPOSITORIES
audb.config.REPOSITORIES = [
audb.Repository('data-public', host, backend),
audb.Repository('data-private', host, backend),
]

yield repository

audb.config.REPOSITORIES = current_repositories


@pytest.fixture(scope='module', autouse=False)
def private_and_public_repository():
r"""Private and public repository on Artifactory.
Expand Down
50 changes: 48 additions & 2 deletions tests/test_backend.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,45 @@
import pytest

import audb


def test_visiting_private_repos(private_and_public_repository):
@pytest.mark.parametrize(
'repos',
[
'public_and_empty_repository',
'empty_and_public_repository',
],
)
def test_visiting_multiple_repos(request, repos):
r"""Tests visiting multiple repos when looking for a database.

When requesting a database,
audb needs to look for it
in every repository on the corresponding backend.

"""
request.getfixturevalue(repos)
db = audb.load(
'emodb',
version='1.4.1',
only_metadata=True,
verbose=False,
)
assert db.name == 'emodb'
df = audb.available(only_latest=True)
assert 'emodb' in df.index
deps = audb.dependencies('emodb', version='1.4.1')
assert 'wav/13b09La.wav' in deps.media


@pytest.mark.parametrize(
'repos',
[
'public_and_private_repository',
'private_and_public_repository',
],
)
def test_visiting_private_repos(request, repos):
r"""Tests visiting private repos when looking for a database.

When requesting a database,
Expand All @@ -11,12 +49,20 @@ def test_visiting_private_repos(private_and_public_repository):
even when the user has no access rights.

"""
audb.load(
request.getfixturevalue(repos)
db = audb.load(
'emodb',
version='1.4.1',
only_metadata=True,
verbose=False,
)
assert db.name == 'emodb'
# The following fails,
# see https://github.com/audeering/audb/issues/340
df = audb.available(only_latest=True)
assert 'emodb' in df.index
# deps = audb.dependencies('emodb', version='1.4.1')
# assert 'wav/13b09La.wav' in deps.media


def test_visiting_non_existing_repos(non_existing_repository):
Expand Down
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