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Issue #, if available:
During aws-cloudformation/cloudformation-coverage-roadmap#43 I actually broke the template because I wasn't aware of this: https://github.com/aws-cloudformation/aws-cloudformation-coverage-roadmap/issues/162
Unfortunately there is no clean solution to the problem apart from duplicating resources and using conditions. Now I tested it and it works.
By submitting this pull request, I confirm that my contribution is made under the terms of the Apache 2.0 license.