Skip to content

Commit

Permalink
Fix confusiong between data and export
Browse files Browse the repository at this point in the history
  • Loading branch information
bgruening committed Mar 1, 2015
1 parent aa6857a commit dfdfc0b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -95,7 +95,7 @@ You can get BLAST databases directly from the [NCBI server](ftp://ftp.ncbi.nlm.n
- Start your Galaxy container with `-v /galaxy_store/data/blast_databases/:/data/` to have access your databases inside of your container
- Start your Galaxy container with ``-v /home/user/galaxy_storage/:/export/`` to export all config files to your host operating system
- Modify your `blast*.loc` files under `/home/user/galaxy_storage/galaxy-central/tool-data/blast*.loc` on your host, or under `/export/galaxy-central/tool-data/blast*.loc` from within your container.
- You need to add the paths to your blast databases. They need to look like `/export/swissprot/swissprot`
- You need to add the paths to your blast databases. They need to look like `/data/swissprot/swissprot`
- Restart your Galaxy instance, for example with ```docker exec <container name> supervisorctl restart galaxy:```

From now on you should see predifined BLAST databases in your Galaxy User Interface if you choose `Locally installed BLAST database`.
Expand Down

0 comments on commit dfdfc0b

Please sign in to comment.