ieeg_epilepsy_ecog: Fix coordinate systems #239
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once more: thanks! |
sappelhoff
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* Minor metadata changes (#231) * Update CHANGES * Update dataset_description.json * Update README * Update sub-emptyroom_task-noise_run-01_meg.json * Fix coordinate systems (#238) * Fix coordinates (#239) * Minor updates for ds000247 (#232) * Update CHANGES * Update dataset_description.json * Update README * Update sub-0002_ses-0001_task-rest_run-01_meg.json * Update sub-0003_ses-0001_task-rest_run-01_meg.json * Update sub-0004_ses-0001_task-rest_run-01_meg.json * Update sub-0006_ses-0001_task-rest_run-01_meg.json * Update sub-0007_ses-0001_task-rest_run-01_meg.json * Update sub-emptyroom_ses-18901014_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18901015_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910228_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910303_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910512_task-noise_run-01_meg.json * validate headers in synthetic ds (#240) * validate headers in synthetic ds * fix str * put if-else into right nesting * beautysh code formatting * run tests on all platforms (#241) * ENH: Add qMRI example datasets * Add READMEs * Authors -> list * Duplicate EchoTime for phasediff, IntendedFor NIfTIs * Authors -> list * Add mt entity to T1w file, MTState to all MTS metadata * qmri_mpm: fix IntendedFor targets * Use EchoTime2 in normal diff range * add qmri ds to README index * pull test script out of gh ci, into own script for local usage * Add flip and inv entities to TB1SRGE Co-authored-by: Julia Guiomar Niso Galán <guiomar.niso@ctb.upm.es> Co-authored-by: Francois <francois.tadel@mcgill.ca> Co-authored-by: Stefan Appelhoff <stefan.appelhoff@mailbox.org>
sappelhoff
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Feb 24, 2021
* ENH: Add qMRI example datasets (#245) * Minor metadata changes (#231) * Update CHANGES * Update dataset_description.json * Update README * Update sub-emptyroom_task-noise_run-01_meg.json * Fix coordinate systems (#238) * Fix coordinates (#239) * Minor updates for ds000247 (#232) * Update CHANGES * Update dataset_description.json * Update README * Update sub-0002_ses-0001_task-rest_run-01_meg.json * Update sub-0003_ses-0001_task-rest_run-01_meg.json * Update sub-0004_ses-0001_task-rest_run-01_meg.json * Update sub-0006_ses-0001_task-rest_run-01_meg.json * Update sub-0007_ses-0001_task-rest_run-01_meg.json * Update sub-emptyroom_ses-18901014_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18901015_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910228_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910303_task-noise_run-01_meg.json * Update sub-emptyroom_ses-18910512_task-noise_run-01_meg.json * validate headers in synthetic ds (#240) * validate headers in synthetic ds * fix str * put if-else into right nesting * beautysh code formatting * run tests on all platforms (#241) * ENH: Add qMRI example datasets * Add READMEs * Authors -> list * Duplicate EchoTime for phasediff, IntendedFor NIfTIs * Authors -> list * Add mt entity to T1w file, MTState to all MTS metadata * qmri_mpm: fix IntendedFor targets * Use EchoTime2 in normal diff range * add qmri ds to README index * pull test script out of gh ci, into own script for local usage * Add flip and inv entities to TB1SRGE Co-authored-by: Julia Guiomar Niso Galán <guiomar.niso@ctb.upm.es> Co-authored-by: Francois <francois.tadel@mcgill.ca> Co-authored-by: Stefan Appelhoff <stefan.appelhoff@mailbox.org> * Add tb1_afi * Add IRT1 and move B1AFI from root-->VFA * Rm tb1afi from root * Add MESE 32 echoes - Monoexponential T2 mapping (T2map and M0map) - Myelin water fraction (MWFmap only) * Add MTRmap and TB1DAM @mts - Fix MTS metadata * QSM - An example method - Add example input * Change dataset type * Add MEGRE * Add TB1TFL * rm B1map from IRT1 dir * rm leftover MESE * Fix SA2RAGE * Fix IRT1 * Metadata and authors * Update Readme * CI errors * Update qmri_qsm/derivatives/qMRLab/sub-01/dataset_description.json Co-authored-by: Chris Markiewicz <effigies@gmail.com> * Update qmri_sa2rage/sub-01/fmap/sub-01_flip-1_inv-1_TB1SRGE.json Co-authored-by: Chris Markiewicz <effigies@gmail.com> * fix typos * drop intended for from anats * drop intended for from anat * drop intended for from anat * Update readme and fix a single json * Fixes around intended for * mv fmap into the right dir * Update qmri_mtsat/sub-01/fmap/sub-01_flip-1_TB1DAM.json Co-authored-by: Chris Markiewicz <effigies@gmail.com> * Update qmri_mtsat/sub-01/fmap/sub-01_flip-2_TB1DAM.json Co-authored-by: Chris Markiewicz <effigies@gmail.com> Co-authored-by: Chris Markiewicz <markiewicz@stanford.edu> Co-authored-by: Julia Guiomar Niso Galán <guiomar.niso@ctb.upm.es> Co-authored-by: Francois <francois.tadel@mcgill.ca> Co-authored-by: Agah Karakuzu <agahkarakuzu@gmail.com> Co-authored-by: Chris Markiewicz <effigies@gmail.com>
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