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Merge pull request #95 from yarikoptic/bf-links2
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Fix up some urls (as detected to be broken/inconsistent
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chrisgorgo authored Nov 25, 2018
2 parents 6006197 + a9d995c commit aaa403f
Showing 1 changed file with 7 additions and 7 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -171,9 +171,9 @@ inplaneT1, referenced by a defacemask image. E.g.,
`sub-01_mod-T1w_defacemask.nii.gz`.

Some meta information about the acquisition MAY be provided in an additional
JSON file. See Common MR metadata fields for a list of terms and their
definitions. There are also some OPTIONAL JSON fields specific to anatomical
scans:
JSON file. See [Common metadata fields](#common-metadata-fields) for a
list of terms and their definitions. There are also some OPTIONAL JSON
fields specific to anatomical scans:

| Field name | Definition |
| :---------------------- | :------------------------------------------------------------------------------------------------------------------------------------------------- |
Expand Down Expand Up @@ -293,7 +293,7 @@ combined image rather than an image from each coil.
| CogAtlasID | RECOMMENDED. URL of the corresponding [Cognitive Atlas](http://www.cognitiveatlas.org/) Task term. |
| CogPOID | RECOMMENDED. URL of the corresponding [CogPO](http://www.cogpo.org/) term. |

See [8.3.1. Common MR metadata fields](#heading=h.5u721tt1h9pe) for a list of
See [Common metadata fields](#common-metadata-fields) for a list of
additional terms and their definitions.

Example:
Expand Down Expand Up @@ -366,7 +366,7 @@ dwi.nii file) and not the magnet’s coordinate system, which means that any
rotations applied to dwi.nii also need to be applied to the corresponding bvec
file.

<sup>4</sup>[http://fsl.fmrib.ox.ac.uk/fsl/fsl4.0/fdt/fdt_dtifit.html](hhttp://fsl.fmrib.ox.ac.uk/fsl/fsl4.0/fdt/fdt_dtifit.html)
<sup>4</sup>[http://fsl.fmrib.ox.ac.uk/fsl/fsl4.0/fdt/fdt_dtifit.html](http://fsl.fmrib.ox.ac.uk/fsl/fsl4.0/fdt/fdt_dtifit.html)

bvec example:

Expand All @@ -390,8 +390,8 @@ bval example:
and thus define those values for all sessions and/or subjects in one place (see
Inheritance principle).

See Common MR metadata fields for a list of additional terms that can be
included in the corresponding JSON file.
See [Common metadata fields](#common-metadata-fields) for a list of
additional terms that can be included in the corresponding JSON file.

JSON example:

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