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Add a new sorting method to set mates of the same alignment adjacent as required by RSEM #379

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emi80 opened this issue Dec 21, 2018 · 3 comments
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Add a new sorting method to set mates of the same alignment adjacent as required by RSEM #379

emi80 opened this issue Dec 21, 2018 · 3 comments

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@emi80
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emi80 commented Dec 21, 2018

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emi80 added a commit to emi80/sambamba that referenced this issue Dec 21, 2018
@emi80
Add new sorting method to pull mates of the same alignment together w…
5143cb4 
…hen sorting by query name - biod#379
@pjotrp
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pjotrp commented Dec 23, 2018

Thanks @emi80. Probably a good idea to add a test to the test suite.

@emi80
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emi80 commented Dec 23, 2018

Hi @pjotrp, yes definitely. I was planning to add one and I already have the test data. I just wanted to make the pull request first, for reference.

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@pjotrp
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pjotrp commented Feb 21, 2019

#383

@pjotrp pjotrp closed this as completed Feb 21, 2019
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