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@biosustain

DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. potion potion Public

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 487 51

  2. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 113 42

  3. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 41 1

  4. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 27 13

  5. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 26 2

  6. snakemake_UmetaFlow snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    Python 24 7

Repositories

Showing 10 of 112 repositories
  • Growth-coupling-suite Public

    A constraint-based metabolic model-based workflow for computing and analyzing microbial strain design which couple a target reaction to growth

    biosustain/Growth-coupling-suite’s past year of commit activity
    Python 3 MIT 1 0 0 Updated Sep 17, 2024
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Sep 17, 2024
  • dsp_pandas Public

    Organize pandas based functionality across projects.

    biosustain/dsp_pandas’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 12, 2024
  • dsp_nfcore_taxprofiler Public

    Taxonomica profiling using nf-core/taxprofiler pipeline

    biosustain/dsp_nfcore_taxprofiler’s past year of commit activity
    Nextflow 0 AGPL-3.0 0 0 0 Updated Sep 11, 2024
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Sep 5, 2024
  • Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    biosustain/Maud’s past year of commit activity
    Python 26 GPL-3.0 2 22 2 Updated Sep 3, 2024
  • biosustain/salb_imodulons’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Aug 25, 2024
  • biosustain/ESS-Designs’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Aug 22, 2024
  • biosustain/code-quality-check’s past year of commit activity
    0 0 0 0 Updated Aug 21, 2024
  • shu Public

    Multi-dimensional, trans-omics metabolic maps.

    biosustain/shu’s past year of commit activity
    Rust 41 Apache-2.0 1 7 1 Updated Aug 19, 2024

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