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Bonsai team

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  1. Porechop_ABI Porechop_ABI Public

    Forked from rrwick/Porechop

    Adapter trimmer for Oxford Nanopore reads using ab initio method

    C++ 38 4

  2. matam matam Public

    Mapping-Assisted Targeted-Assembly for Metagenomics

    Python 19 9

  3. DiNAMO DiNAMO Public

    Discriminative DNA IUPAC motif discovery tool

    C++ 5 1

  4. ComponentSearch3 ComponentSearch3 Public

    Forked from DreadBonney/ComponentSearch3

    C++ 2

  5. yass yass Public

    Forked from laurentnoe/yass

    genomic alignment similarity search tool

    C 1

  6. ComponentSearch ComponentSearch Public

    Forked from yoann-dufresne/ContigSearch

    ContigSearch

    Java

Repositories

Showing 10 of 16 repositories
  • Porechop_ABI Public Forked from rrwick/Porechop

    Adapter trimmer for Oxford Nanopore reads using ab initio method

    bonsai-team/Porechop_ABI’s past year of commit activity
    C++ 38 GPL-3.0 131 5 0 Updated Nov 21, 2024
  • iedera Public Forked from laurentnoe/iedera

    subset and spaced seed design tool

    bonsai-team/iedera’s past year of commit activity
    C++ 0 BSD-3-Clause 1 0 0 Updated May 28, 2024
  • yass Public Forked from laurentnoe/yass

    genomic alignment similarity search tool

    bonsai-team/yass’s past year of commit activity
    C 1 GPL-3.0 6 0 0 Updated May 28, 2024
  • matam Public

    Mapping-Assisted Targeted-Assembly for Metagenomics

    bonsai-team/matam’s past year of commit activity
    Python 19 AGPL-3.0 9 43 0 Updated Mar 31, 2023
  • ComponentSearch2 Public Forked from yoann-dufresne/ComponentSearch2
    bonsai-team/ComponentSearch2’s past year of commit activity
    C++ 0 AGPL-3.0 1 0 0 Updated Mar 27, 2023
  • sortmerna Public Forked from sortmerna/sortmerna

    SortMeRNA: next-generation sequence filtering and alignment tool

    bonsai-team/sortmerna’s past year of commit activity
    C++ 0 GPL-3.0 68 0 0 Updated Apr 2, 2020
  • DiNAMO Public

    Discriminative DNA IUPAC motif discovery tool

    bonsai-team/DiNAMO’s past year of commit activity
    C++ 5 AGPL-3.0 1 4 0 Updated Jun 13, 2018
  • conda_recipes Public
    bonsai-team/conda_recipes’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 12, 2017
  • aln2gfa2 Public
    bonsai-team/aln2gfa2’s past year of commit activity
    Python 0 0 0 0 Updated Aug 31, 2017
  • stage_ambre Public
    bonsai-team/stage_ambre’s past year of commit activity
    Python 0 0 0 0 Updated Aug 31, 2017
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