paprica_v0.8.0

Improvements to Dockerfile for long-term stability, minor changes in response to pandas FutureWarnings, speed improvement to paprica-combine_results.py

paprica_v0.7.2

Add gRodon doubling time estimates. This will be the last release for 0.7.

paprica_v0.7.1

Preparing for v0.8.0. This is a stable release utilizing the nested phylogenetic tree approach and several other enhancements.

paprica_v0.7.0

First stable release utilizing nested reference trees for phylogenetic placement.

paprica_v0.6

Significant updates to make paprica-build compatible with pathway-tools v24, and move to RAxML-ng

paprica_v0.5.2

fix unique seqs

Update to Python 3.3 broke the way we were using hashes to define unique
seqs.  For now just using complete sequence in unique sequence name,
which is cumbersome but functional.

paprica_v0.5.1

remove !!

paprica_v0.5.0

This is the first release for Python 3. All core scripts for paprica-run.sh and paprica-build.sh are Python 3, however, some of the utilities are still Python 2.7.

paprica_v0.4.1b

Last stable paprica Python 2.7 release

paprica_0.4.1

Last version before implementation of epa-ng for phylogenetic placement.