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GGVCFs changes to revert "no data" calls to "./." and change GQ0 hom-refs to no-calls #3988

GGVCFs changes to revert "no data" calls to "./." and change GQ0 hom-refs to no-calls

GGVCFs changes to revert "no data" calls to "./." and change GQ0 hom-refs to no-calls #3988

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2 errors and 1 warning

Java 17.0.6+10 test on docker variantcalling

failed Apr 2, 2024 in 28m 57s