Update htsjdk to 2.18.2

[lbergelson]

• Updating htsjdk 2.18.1 -> 2.18.2
• Remove deprecated method use
• Changing IntervalUtilsUnitTest due to changes in IntervalList
  • IntervalList now rejects certain invalid intervals that it previously didn't and throw IllegalArgumentException.
  • This ends up changing which exceptions are thrown in some cases, updated some tests to accept both MalformedFile and MalforedGenomeLoc.

[codecov-io]

Codecov Report

Merging #5585 into master will increase coverage by 0.006%.
The diff coverage is 100%.

@@              Coverage Diff               @@
##             master     #5585       +/-   ##
==============================================
+ Coverage     87.04%   87.046%   +0.006%     
- Complexity    31490     31492        +2     
==============================================
  Files          1924      1924               
  Lines        145189    145189               
  Branches      16082     16082               
==============================================
+ Hits         126373    126381        +8     
+ Misses        12958     12951        -7     
+ Partials       5858      5857        -1

Impacted Files	Coverage Δ	Complexity Δ
...titute/hellbender/utils/IntervalUtilsUnitTest.java	91.906% <ø> (ø)	146 <0> (ø)	⬇️
...e/spark/datasources/VariantsSparkSinkUnitTest.java	82.171% <100%> (ø)	28 <0> (ø)	⬇️
...nder/utils/runtime/StreamingProcessController.java	67.773% <0%> (+0.474%)	33% <0%> (ø)	⬇️
...ithwaterman/SmithWatermanIntelAlignerUnitTest.java	90% <0%> (+30%)	2% <0%> (ø)	⬇️
...utils/smithwaterman/SmithWatermanIntelAligner.java	90% <0%> (+40%)	3% <0%> (+2%)	⬆️

[droazen]

👍 merge when tests pass