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Add coverage_mt option to annotate_sex which takes an optional precomputed coverage MT to use for ploidy imputation instead of remaking it. #484

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merged 3 commits into from
Oct 5, 2022

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jkgoodrich
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Will currently fail tests because I am waiting on a PR in Hail: hail-is/hail#12195

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@mike-w-wilson mike-w-wilson left a comment

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This looks good to me as is so approving but I'm guessing we'd wait to merge until the hail PR is in?

@jkgoodrich jkgoodrich merged commit 90ec476 into main Oct 5, 2022
@jkgoodrich jkgoodrich deleted the jg/annotate_sex_add_coverage_mt_option branch October 5, 2022 17:40
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