Version 4.12.3

• Removed the Reference genome GRCh37 from the sample submission template options.
• Fixed the index dropdown in the sample submission template.

Version 4.12.2

• Fix error when selecting date for prefilling in labwork step.

v4.12.1

• Fix Project Study Page
  • Fix remove button
  • Fix loading samples

Version 4.12.0

• Sample QC step was split into Sample QC (DNA) and Sample QC (RNA) steps to better reflect lab logic.
• Samplesheet generation improved to provide more information (info sheet) and to include the germline step configuration.
• Sample submission template index listed was expanded to better cover typical requests.
• Sample submission template now allow for the creation of parent containers at submission.
• Sample submission template now uses the taxon name instead on the NCBI ID number.
• Sample submission template now only offer DNA and RNA sample kind for Library and library in pool.
• Sample submission template has a dropdown to change the order (Column (default) or Row) of the coordinates offered.
• Sample submission template now copy the container name over to the container barcode to facilitate user input.
• Removed rarely used columns from Sample submission template (Individual pedigree, father and mother).
• Reordered some columns in various templates.
• Added Container barcode, coordinates and location to the associated sample of the project to help select samples.
• Removed the option to submit concentration during the extraction step.
• Improved the way of displaying removed samples from steps in the project study display.
• Sorted datasets in experiment run list for validation by ascending lane number.
• Remove the "Go Back" button at the end of the template submission.
• Sample QC instruments prefill options on the labwork step modal now match the instruments listed on the template.
• QC steps no longer require the measured volume to be provided.
• Tweaked the interface to release/block data on the dataset's readset table.
• Fixed issue with table filters showing the wrong results for slow queries.
• Included Illumina iSeq100 to the available instruments on the template for pooling index validation.
• Add the instrument serial number to the instrument names in the Experiment run template.
• Add missing lab technician name to library capture, library conversion and library preparation templates.
• Experiment run table default filter is now Illumina / All.
• Removed some unused code.

Version 4.11.2

• Increased the tolerance for the concentration validation during the normalization template ingestion.

Version 4.11.1

• Fixed a crash when exporting samples with no project.

Version 4.11.0

• Added an mechanism to allow queueing samples to study workflows from the Project associated samples list.
• Created a new workflow action that allow samples to remain on a workflow step while their child move on to the next step.
• Filter experiment list by run_types and by progression in their processing allowing for a simpler view.
• Sample submission template now create generic individual for samples that declare a taxon in the template.
• Default Reference genomes are used for "Homo sapiens" and "Mus musculus" if none are declared in the sample submission template.
• Added of a filter to allow validation emails to be sent by Triton.
• Added Released_by and Validated_by fields to the readset model.
• Container kind was added to the run info file json.
• Projects now have their external_project_id listed.
• Sample kind SERUM added to the sample submission template.
• Fixed an issue with filtering by cohort in the Project section associated samples tab.
• Prevented empty string being inserted as external_project_id in the database.
• Fixed an issue with tooltips being cut short on read set count graphs under some conditions.

Version 4.10.1

• Fix an issue with the ordering of the destination samples during placement.

Version 4.10.0

• Move the project from derivedsample model to derivedbysample model. This allow for sample moved using Transfer to be changed project without waiting for a step that create a new derivedsample.
• Addition of a Project and Study optional columns on the Transfer Template in order to allow changing project at the same time as doing a transfer.
• Add a button to download the run samplesheet during experiment step placement.
• Remove the unique identifier from the destination container barcode when doing pooling planning.
• Remove the numeric part from the destination container barcode of the robot file generated during the pooling planning.
• Project with long names get ellipsed in the middle in the run validation comment box.
• Display samples Project in the placement tables and adjust ordering to take it into account.
• Display source container only when pertinent on the placement table destination side.
• Prevent users from being able to restart an experiment run by themselves (allowed for staff).
• Produce a file mapping containers to the files produced when doing a pooling planning.

Version 4.9.1

Fix Placement (#798) (#801)

* set default placement type to pattern

* change sorting for placement samples table

* more tweaks

* fix sorting

* reverse comparison

* default to column direction

* correct comment

* allow wrap around

* use reverse of offsets only

* use enum index