Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix Sift and Polyphen blank in NRAS #5039

Merged
merged 1 commit into from
Nov 11, 2024

Conversation

leexgh
Copy link
Member

@leexgh leexgh commented Nov 5, 2024

Fix: cBioPortal/cbioportal#11150
Get Sift and Polyphen data from the selected/active transcript, instead of always getting from the first transcript.
Testing: add Functional Impact column in mutation table (link)

Before:
image

After:
image

Copy link

netlify bot commented Nov 5, 2024

Deploy Preview for cbioportalfrontend ready!

Name Link
🔨 Latest commit 8146f55
🔍 Latest deploy log https://app.netlify.com/sites/cbioportalfrontend/deploys/67326ded4b4d1b00082fe6d0
😎 Deploy Preview https://deploy-preview-5039.cancerrevue.org
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify site configuration.

Copy link
Member

@onursumer onursumer left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM!

@@ -25,6 +25,7 @@ import GenomeNexusCache, {
} from 'shared/cache/GenomeNexusCache';
import _ from 'lodash';
import { shouldShowMutationAssessor } from 'shared/lib/genomeNexusAnnotationSourcesUtils';
import { selected } from 'pages/studyView/table/tables.module.scss';
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

ideally shared components should not import from pages, but we probably broke that convention many times already, so not a big deal.

Copy link
Member Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Actrually this is an unused import. Removed this line.

Show Sift and Polyphen by different transcript
@onursumer onursumer merged commit 84108c1 into cBioPortal:master Nov 11, 2024
13 of 15 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

For functional impact show gray benign dot
2 participants