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Add citation.cff

Add citation.cff #881

Workflow file for this run

name: CI
on:
push:
branches:
- master
- dev
pull_request:
workflow_dispatch:
inputs:
ref:
description: 'Commit hash, branch name, or tag to run the CI pipeline for'
required: false
default: 'HEAD'
type: string
jobs:
Win64:
runs-on: windows-latest
strategy:
fail-fast: true
env:
BASE_DIR: ${{ github.workspace }}
SRC_DIR: ${{ github.workspace }}/src
BUILD_DIR: ${{ github.workspace }}/build
INSTALL_PREFIX: ${{ github.workspace }}/cadet
steps:
- uses: actions/checkout@v4
with:
submodules: true
path: src
ref: ${{ github.event.inputs.ref || github.ref }}
- uses: ilammy/msvc-dev-cmd@v1
- name: Get MSVC version
id: get-msvc
run: |
$MSVC_VERSION = cl 2>&1 | Select-String -Pattern 'Version (\d\d\.\d\d)' | % { $_.matches.groups[1].Value }
echo "version=$MSVC_VERSION" >> $Env:GITHUB_OUTPUT
- uses: actions/cache@v4
id: cache
with:
path: |
${{ github.workspace }}/hdf5
${{ github.workspace }}/suitesparse/install
${{ github.workspace }}/eigen/install
key: ${{ runner.os }}-deps-${{ steps.get-msvc.outputs.version }}-1
- name: Download MKL and TBB
run: |
cd "${env:BASE_DIR}"
$base_dir = $($env:BASE_DIR.Replace('\', '/'))
nuget install inteltbb.devel.win -Version 2021.8.0.25874
nuget install intelmkl.static.win-x64 -Version 2023.0.0.25930
Invoke-WebRequest -Uri "https://gitlab.com/libeigen/eigen/-/archive/master/eigen-master.zip" -OutFile eigen.zip
7z x eigen.zip
- name: Build UMFPACK and HDF5 and Eigen3
if: steps.cache.outputs.cache-hit != 'true'
run: |
$base_dir = $($env:BASE_DIR.Replace('\', '/'))
Invoke-WebRequest -Uri "https://www.hdfgroup.org/package/cmake-hdf5-1-14-0-zip/?wpdmdl=17553" -OutFile hdf5.zip
7z x hdf5.zip
cd CMake-hdf5-1.14.0
cmake -DCMAKE_BUILD_TYPE:STRING=Release -DBUILD_SHARED_LIBS:BOOL=ON -DHDF5_BUILD_FORTRAN:BOOL=OFF -DHDF5_ENABLE_F2003:BOOL=OFF -DHDF5_BUILD_JAVA:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH="${base_dir}/hdf5" -DCTEST_CONFIGURATION_TYPE:STRING=Release -DBUILD_TESTING=ON -DHDF5_BUILD_TOOLS=OFF -DHDF5_BUILD_EXAMPLES=OFF -DHDF5_BUILD_HL_LIB=OFF -DHDF5_BUILD_CPP_LIB=OFF -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRING=TGZ -DTGZPATH:PATH="${base_dir}/CMake-hdf5-1.14.0" -DHDF5_PACKAGE_EXTLIBS:BOOL=ON -DSITE:STRING=WIN10VS202264.XXXX -DBUILDNAME:STRING=Windows-WIN10-vs2022-STATIC -G "Ninja" hdf5-1.14.0
ninja install
cd "${env:BASE_DIR}"
Invoke-WebRequest -Uri "https://github.com/DrTimothyAldenDavis/SuiteSparse/archive/v5.7.2.zip" -OutFile suitesparse.zip
7z x suitesparse.zip -osuitesparse\code -y
Invoke-WebRequest -Uri "https://github.com/jlblancoc/suitesparse-metis-for-windows/archive/e8d953dffb8a99aa8b65ff3ff03e12a3ed72f90c.zip" -OutFile ssb.zip
7z x ssb.zip -osuitesparse\code -y
cd ${env:BASE_DIR}\suitesparse\code
xcopy .\SuiteSparse-5.7.2 .\suitesparse-metis-for-windows-e8d953dffb8a99aa8b65ff3ff03e12a3ed72f90c\SuiteSparse /s /e /y /q
cd "${env:BASE_DIR}\suitesparse\code\suitesparse-metis-for-windows-e8d953dffb8a99aa8b65ff3ff03e12a3ed72f90c"
Remove-Item -ErrorAction Ignore -Recurse -Force lapack_windows
Remove-Item -ErrorAction Ignore -Recurse -Force lapack_windows
cd "${env:BASE_DIR}\suitesparse\code"
mkdir build
cd build
$ENV:MKLROOT="${env:BASE_DIR}/intelmkl.static.win-x64.2023.0.0.25930/lib/native/win-x64".Replace('\', '/')
cmake -DCMAKE_INSTALL_PREFIX="${base_dir}\suitesparse\install" -DBLA_VENDOR=Intel10_64lp_seq -DBLA_STATIC=ON -G "Ninja" -DCMAKE_C_FLAGS="/GL" -DCMAKE_STATIC_LINKER_FLAGS="/LTCG" -DCMAKE_BUILD_TYPE=Release -DBUILD_METIS=OFF ..\suitesparse-metis-for-windows-e8d953dffb8a99aa8b65ff3ff03e12a3ed72f90c\
ninja install
cd "${env:BASE_DIR}"
Invoke-WebRequest -Uri "https://gitlab.com/libeigen/eigen/-/archive/3.4.0/eigen-3.4.0.zip" -OutFile eigen.zip
7z x eigen.zip -oeigen\code -y
cd eigen
mkdir build
cd build
cmake ../code/eigen-3.4.0 -DCMAKE_INSTALL_PREFIX="../install"
cmake --build . --target install
- name: Build and Install
run: |
cd "${env:BASE_DIR}"
cmake -E make_directory "${env:BUILD_DIR}"
cmake -E make_directory "${env:INSTALL_PREFIX}"
cd "${env:BUILD_DIR}"
$ENV:MKLROOT="${env:BASE_DIR}/intelmkl.static.win-x64.2023.0.0.25930/lib/native/win-x64".Replace('\', '/')
$ENV:TBB_ROOT="${env:BASE_DIR}/inteltbb.devel.win.2021.8.0.25874/lib/native".Replace('\', '/')
$ENV:UMFPACK_ROOT="${env:BASE_DIR}/suitesparse/install".Replace('\', '/')
$ENV:Eigen3_DIR="${env:BASE_DIR}/eigen/install".Replace('\', '/')
$install_prefix = $($env:INSTALL_PREFIX.Replace('\', '/'))
$src_dir = $($env:SRC_DIR.Replace('\', '/'))
$base_dir = $($env:BASE_DIR.Replace('\', '/'))
cmake -G "Ninja" -DCMAKE_INSTALL_PREFIX="${install_prefix}" -DCMAKE_BUILD_TYPE=Release -DHDF5_ROOT="${base_dir}/hdf5" -DENABLE_STATIC_LINK_DEPS=ON -DENABLE_STATIC_LINK_LAPACK=ON -DBLA_VENDOR=Intel10_64lp_seq "${src_dir}" -DENABLE_TESTS=ON
ninja
ninja install
- name: Include Deps and Package
run: |
cd "${env:BASE_DIR}"
Copy-Item "${env:BASE_DIR}\inteltbb.redist.win.2021.8.0.25874\runtimes\win-x64\native\tbb12.dll" "${env:INSTALL_PREFIX}\bin\"
Copy-Item "${env:BASE_DIR}\inteltbb.redist.win.2021.8.0.25874\runtimes\win-x64\native\tbb12.dll" "${env:BUILD_DIR}\src\cadet-cli\"
Copy-Item "${env:BASE_DIR}\inteltbb.redist.win.2021.8.0.25874\runtimes\win-x64\native\tbb12.dll" "${env:BUILD_DIR}\test\"
7z a "${env:BASE_DIR}\cadet-${{ runner.os }}.zip" cadet\
- name: Check if it runs
run: |
cd "${env:INSTALL_PREFIX}\bin"
.\cadet-cli.exe --version
.\createLWE.exe
.\cadet-cli.exe LWE.h5
- name: Upload Artifacts
uses: actions/upload-artifact@v4
with:
name: cadet-${{ runner.os }}
retention-days: 5
path: ${{ github.workspace }}/cadet-${{ runner.os }}.zip
Ubuntu-latest:
runs-on: ubuntu-latest
strategy:
fail-fast: true
defaults:
run:
shell: bash -l {0}
env:
SRC_DIR: ${{ github.workspace }}/src
BUILD_DIR: ${{ github.workspace }}/build
INSTALL_PREFIX: ${{ github.workspace }}/install
BUILD_TYPE: Release
steps:
- uses: actions/checkout@v4
with:
submodules: true
path: src
ref: ${{ github.event.inputs.ref || github.ref }}
- name: Install Dependencies
run: |
sudo apt-get update
sudo apt -y install \
build-essential \
libhdf5-dev \
liblapack-dev \
libblas-dev \
libtbb-dev \
libsuperlu-dev \
libeigen3-dev;
- name: Build and Install
run: |
cmake -E make_directory "${BUILD_DIR}"
cmake -E make_directory "${INSTALL_PREFIX}"
cd "${BUILD_DIR}"
cmake -DCMAKE_INSTALL_PREFIX="${INSTALL_PREFIX}" -DCMAKE_BUILD_TYPE="${BUILD_TYPE}" "${SRC_DIR}" -DENABLE_TESTS=ON -DNUM_MAX_AD_DIRS=157
make install -j$(nproc)
- name: Check if it runs
run: |
export LD_LIBRARY_PATH=${INSTALL_PREFIX}/lib:$LD_LIBRARY_PATH
${INSTALL_PREFIX}/bin/cadet-cli --version || true
${INSTALL_PREFIX}/bin/createLWE
${INSTALL_PREFIX}/bin/cadet-cli LWE.h5 || true
- name: Run tests
run: |
${BUILD_DIR}/test/testRunner [CI]
MacOS:
runs-on: macos-latest
strategy:
fail-fast: true
defaults:
run:
shell: bash -l {0}
env:
SRC_DIR: ${{ github.workspace }}/src
BUILD_DIR: ${{ github.workspace }}/build
INSTALL_PREFIX: ${{ github.workspace }}/install
BUILD_TYPE: Release
steps:
- uses: actions/checkout@v4
with:
submodules: true
path: src
ref: ${{ github.event.inputs.ref || github.ref }}
- name: Install Dependencies
run: |
brew update > /dev/null || true
brew install cmake
brew install hdf5
brew install tbb
brew install eigen
- name: Build and Install
run: |
cmake -E make_directory "${BUILD_DIR}"
cmake -E make_directory "${INSTALL_PREFIX}"
cd "${BUILD_DIR}"
cmake -DCMAKE_INSTALL_PREFIX="${INSTALL_PREFIX}" -DCMAKE_BUILD_TYPE="${BUILD_TYPE}" "${SRC_DIR}" -DENABLE_TESTS=ON
make install -j$(sysctl -n hw.logicalcpu)
- name: Check if it runs
run: |
${INSTALL_PREFIX}/bin/cadet-cli --version || true
${INSTALL_PREFIX}/bin/createLWE
${INSTALL_PREFIX}/bin/cadet-cli LWE.h5 || true