Skip to content
@califano-lab

Califano Lab

Popular repositories Loading

  1. ARACNe-AP ARACNe-AP Public

    Network Reverse Engineering through AP inference of Mutual Information

    Java 81 24

  2. PISCES PISCES Public

    R package for Protein activity analysis of single-cell RNAseq.

    R 76 24

  3. single-cell-pipeline single-cell-pipeline Public

    HTML 42 8

  4. OncoSig OncoSig Public

    Code to run OncoSig Analyses

    R 18 5

  5. NaRnEA NaRnEA Public

    NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)

    R 9 4

  6. MOMA MOMA Public

    R 6 3

Repositories

Showing 10 of 31 repositories
  • acdc_py Public

    scanpy-compatible suite for automated clustering of scRNA-seq data in python

    califano-lab/acdc_py’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Nov 16, 2024
  • PISCES_networks Public

    Repository of networks from the PISCES project

    califano-lab/PISCES_networks’s past year of commit activity
    0 0 0 0 Updated Nov 12, 2024
  • Immune-Nets-Snakemake-Pipeline Public
    califano-lab/Immune-Nets-Snakemake-Pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Oct 29, 2024
  • MAPK_Experimental_Signature Public

    This repository contains an example of code to generate a MAPK Experimental Signature from PlateSeq data

    califano-lab/MAPK_Experimental_Signature’s past year of commit activity
    R 0 0 0 0 Updated Aug 30, 2024
  • vespa.tutorial Public

    Tutorials on how to use the VESPA algorithm

    califano-lab/vespa.tutorial’s past year of commit activity
    R 0 0 0 0 Updated Mar 1, 2024
  • vespa.net Public

    VESPA (Virtual Enrichment-based Signaling Protein-activity Analysis) signaling network inference module

    califano-lab/vespa.net’s past year of commit activity
    Python 0 0 0 0 Updated Mar 1, 2024
  • vespa.db Public

    VESPA (Virtual Enrichment-based Signaling Protein-activity Analysis) supplementary data package

    califano-lab/vespa.db’s past year of commit activity
    R 0 0 0 0 Updated Mar 1, 2024
  • vespa.aracne Public

    VESPA (Virtual Enrichment-based Signaling Protein-activity Analysis) ARACNe module

    califano-lab/vespa.aracne’s past year of commit activity
    Java 0 0 0 0 Updated Mar 1, 2024
  • vespa Public

    VESPA (Virtual Enrichment-based Signaling Protein-activity Analysis) algorithm

    califano-lab/vespa’s past year of commit activity
    R 1 0 0 0 Updated Mar 1, 2024
  • acdc Public

    suite for clustering of scRNA-seq data (beta version)

    califano-lab/acdc’s past year of commit activity
    R 0 0 0 0 Updated Jun 11, 2023
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…