bumped version, fixes #37

cancerit · Oct 11, 2019 · cda6afd · cda6afd
1 parent f848d51
commit cda6afd
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diff --git a/CHANGES.md b/CHANGES.md
@@ -1,5 +1,9 @@
 # CHANGES
 
+## 2.4.1
+
+* added a patched topaht-fusion-post script, in which the contig name bug #37 is fixed
+
 ## 2.4.0
 
 * Revised Dockerfile so that the builder stage is properly used and the image size is reduced. Resolved #28.

diff --git a/Dockerfile b/Dockerfile
@@ -90,7 +90,7 @@ FROM ubuntu:16.04
 
 LABEL maintainer="cgphelp@sanger.ac.uk" \
       uk.ac.sanger.cgp="Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute" \
-      version="2.4.0" \
+      version="2.4.1" \
       description="cgpRna docker"
 
 # Version of tools that are installed in both stages, make sure they are consistent.

diff --git a/cwls/tools/merge_and_mark_dups.cwl b/cwls/tools/merge_and_mark_dups.cwl
@@ -20,7 +20,7 @@ doc: |
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/cgprna:2.4.0"
+    dockerPull: "quay.io/wtsicgp/cgprna:2.4.1"
 
 hints:
   - class: ResourceRequirement

diff --git a/cwls/tools/run-cgprna_bigwig.cwl b/cwls/tools/run-cgprna_bigwig.cwl
@@ -20,7 +20,7 @@ doc: |
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/cgprna:2.4.0"
+    dockerPull: "quay.io/wtsicgp/cgprna:2.4.1"
 
 hints:
   - class: ResourceRequirement

diff --git a/cwls/tools/run-cgprna_htseq-count.cwl b/cwls/tools/run-cgprna_htseq-count.cwl
@@ -20,7 +20,7 @@ doc: |
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/cgprna:2.4.0"
+    dockerPull: "quay.io/wtsicgp/cgprna:2.4.1"
 
 hints:
   - class: ResourceRequirement

diff --git a/cwls/tools/run-cgprna_star-map.cwl b/cwls/tools/run-cgprna_star-map.cwl
@@ -20,7 +20,7 @@ doc: |
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/cgprna:2.4.0"
+    dockerPull: "quay.io/wtsicgp/cgprna:2.4.1"
   - class: InlineJavascriptRequirement
 
 hints:

diff --git a/cwls/tools/run-cgprna_stats.cwl b/cwls/tools/run-cgprna_stats.cwl
@@ -20,7 +20,7 @@ doc: |
 
 requirements:
   - class: DockerRequirement
-    dockerPull: "quay.io/wtsicgp/cgprna:2.4.0"
+    dockerPull: "quay.io/wtsicgp/cgprna:2.4.1"
 
 hints:
   - class: ResourceRequirement

diff --git a/perl/lib/Sanger/CGP/CgpRna.pm b/perl/lib/Sanger/CGP/CgpRna.pm
@@ -36,7 +36,7 @@ use strict;
 use Const::Fast qw(const);
 use base 'Exporter';
 
-our $VERSION = '2.4.0';
+our $VERSION = '2.4.1';
 our @EXPORT = qw($VERSION);
 
 1;