Prettify Typer and add .commit0.yaml. Also fix cli related baseline issue

.github/workflows/system.yml

@@ -21,17 +21,17 @@ jobs:
       - name: Set up commit0
         run: uv run commit0 setup simpy
       - name: Build docker images
-        run: uv run commit0 build simpy
+        run: uv run commit0 build
       - name: Get tests
         run: uv run commit0 get-tests simpy
       - name: Test
         run: uv run commit0 test simpy tests/test_event.py::test_succeed --reference
       - name: Evaluate
-        run: uv run commit0 evaluate simpy --reference
+        run: uv run commit0 evaluate --reference
       - name: Lint
         run: uv run commit0 lint commit0/harness/lint.py
       - name: Save
         env:
           GITHUB_TOKEN: ${{ secrets.MY_GITHUB_TOKEN }}
         run: |
-          uv run commit0 save simpy test-save-commit0 master
+          uv run commit0 save test-save-commit0 master

.gitignore

@@ -164,4 +164,5 @@ cython_debug/
 logs/
 repos/
 config.yml
-hydra_outputs/
+hydra_outputs/
+.commit0*

baselines/class_types.py

@@ -1,15 +1,6 @@
 from dataclasses import dataclass
 
 
-@dataclass
-class Commit0Config:
-    base_dir: str
-    dataset_name: str
-    dataset_split: str
-    repo_split: str
-    num_workers: int
-
-
 @dataclass
 class AgentConfig:
     agent_name: str

baselines/configs/agent.yaml

@@ -3,9 +3,6 @@ defaults:
   - base
   - _self_
 
-commit0_config:
-  repo_split: minitorch
-
 agent_config:
   use_user_prompt: false
   use_repo_info: false

baselines/configs/base.yaml

@@ -1,15 +1,6 @@
 defaults:
   - _self_
 
-
-
-commit0_config:
-  base_dir: repos
-  dataset_name: "wentingzhao/commit0_docstring"
-  dataset_split: "test"
-  repo_split: "simpy"
-  num_workers: 10
-
 agent_config:
   agent_name: "aider"
   model_name: "claude-3-5-sonnet-20240620"

baselines/run_agent.py

@@ -15,11 +15,12 @@
 from typing import Optional, Type
 from types import TracebackType
 from hydra.core.config_store import ConfigStore
-from baselines.class_types import AgentConfig, Commit0Config
+from baselines.class_types import AgentConfig
 from commit0.harness.constants import SPLIT
 from commit0.harness.get_pytest_ids import main as get_tests
 from commit0.harness.constants import RUN_AIDER_LOG_DIR, RepoInstance
 from tqdm import tqdm
+from commit0.cli import read_commit0_dot_file
 
 
 class DirContext:
@@ -40,7 +41,7 @@ def __exit__(
 
 
 def run_agent_for_repo(
-    commit0_config: Commit0Config,
+    repo_base_dir: str,
     agent_config: AgentConfig,
     example: RepoInstance,
 ) -> None:
@@ -55,7 +56,7 @@ def run_agent_for_repo(
     test_files_str = get_tests(repo_name, verbose=0)
     test_files = sorted(list(set([i.split(":")[0] for i in test_files_str])))
 
-    repo_path = os.path.join(commit0_config.base_dir, repo_name)
+    repo_path = os.path.join(repo_base_dir, repo_name)
     repo_path = os.path.abspath(repo_path)
     try:
         local_repo = Repo(repo_path)
@@ -82,13 +83,15 @@ def run_agent_for_repo(
         local_repo.git.reset("--hard", example["base_commit"])
     target_edit_files = get_target_edit_files(repo_path)
     with DirContext(repo_path):
-        if commit0_config is None or agent_config is None:
+        if agent_config is None:
             raise ValueError("Invalid input")
 
         if agent_config.run_tests:
             # when unit test feedback is available, iterate over test files
             for test_file in test_files:
-                test_cmd = f"python -m commit0 test {repo_path} {run_id} {test_file}"
+                test_cmd = (
+                    f"python -m commit0 test {repo_path} {test_file} --branch {run_id}"
+                )
                 test_file_name = test_file.replace(".py", "").replace("/", "__")
                 log_dir = RUN_AIDER_LOG_DIR / "with_tests" / test_file_name
                 lint_cmd = get_lint_cmd(local_repo, agent_config.use_lint_info)
@@ -119,26 +122,26 @@ def main() -> None:
     Will run in parallel for each repo.
     """
     cs = ConfigStore.instance()
-    cs.store(name="user", node=Commit0Config)
     cs.store(name="user", node=AgentConfig)
     hydra.initialize(version_base=None, config_path="configs")
     config = hydra.compose(config_name="agent")
-    commit0_config = Commit0Config(**config.commit0_config)
     agent_config = AgentConfig(**config.agent_config)
 
+    commit0_config = read_commit0_dot_file(".commit0.yaml")
+
     dataset = load_dataset(
-        commit0_config.dataset_name, split=commit0_config.dataset_split
+        commit0_config["dataset_name"], split=commit0_config["dataset_split"]
     )
     filtered_dataset = [
         example
         for example in dataset
-        if commit0_config.repo_split == "all"
+        if commit0_config["repo_split"] == "all"
         or (
             isinstance(example, dict)
             and "repo" in example
             and isinstance(example["repo"], str)
             and example["repo"].split("/")[-1]
-            in SPLIT.get(commit0_config.repo_split, [])
+            in SPLIT.get(commit0_config["repo_split"], [])
         )
     ]
     assert len(filtered_dataset) > 0, "No examples available"
@@ -149,14 +152,14 @@ def main() -> None:
     with tqdm(
         total=len(filtered_dataset), smoothing=0, desc="Running Aider for repos"
     ) as pbar:
-        with multiprocessing.Pool(processes=commit0_config.num_workers) as pool:
+        with multiprocessing.Pool(processes=10) as pool:
             results = []
 
             # Use apply_async to submit jobs and add progress bar updates
             for example in filtered_dataset:
                 result = pool.apply_async(
                     run_agent_for_repo,
-                    args=(commit0_config, agent_config, example),
+                    args=(commit0_config["base_dir"], agent_config, example),
                     callback=lambda _: pbar.update(
                         1
                     ),  # Update progress bar on task completion

commit0/__main__.py

@@ -1,4 +1,4 @@
-from commit0.cli import app as commit0_app
+from commit0.cli import commit0_app
 
 
 def main() -> None: