CWLGen Deprecation

In this release we deprecate CWLGen, please use cwl-utils >= 0.4. A migration note is available on the README#deprecated.

Various fixes

This release contains a number of small various fixes for the cwlgen library, namely:

• Add required fields for workflow / commandline tool to ensure these are exported (#45)
• Add more parameters (inputs, outputs, steps, etc) to Workflow and CommandLineTool for single line instantiation (#34)
• Bumps ruamel.yaml range to match cwltool (common-workflow-language/cwltool@b7aaee4)
• Allow hints to accept and bind Requirements correctly (#36)
• Fix DockerRequirement directory typo (#44, thanks @martinchapman!)

Better automatic requirements parsing + new Stderr type

Backwards incompatible change:

• Rename of InlineJavascriptReq to InlineJavascriptRequirement to better align with spec

Release will contain:

• New STDERR type (#31)
• Better automated requirements parsing (#26)
• Updated ruamel-yaml requirement (#30)

Release Candidate: More translation classes + new mechanic

This release brings a new translation mechanism for the CWL classes, more classes for the CWL v1.0 spec, including a complete set of requirements.

Please raise an issue if you find classes are missing or features are not complete.

Additionally, there is (beta) functionality for converting a CWL file into these CWLGen classes.

v0.2.8

• Making workflow step run field expansion something that can be turned off (@kellrott)

v0.2.1

• Change order of attribute for CommandLineTool
• remove id field of input and output that appeared in v0.2.0

v0.2.0

• Add import feature for what is covered so far by the library
• Change attribute names of object to correspond exactly to CWL Tool fields

v0.1.0

This is the first release of Python-cwlgen:

• Basic model of CWL Tool
• export feature to STDOUT or output file