VisualDEP It's a tool that compares two highly similar structures with respect to their electrostatic properties. This comparison is done calculating the difference in electrostatic potential at atomic level between both structures, also calculates a normalized difference at atomic level, and an average normalized difference (AND) global value.
username@hostname my/path/to/visualdep $ python visualdep.py structure1.pdb structure2.pdb
- José Martínez-Oyanedel jmartine@udec.cl
- Natalia Jaña-Perez njana@udec.cl
- Carlos Ríos-Vera. crosvera@gmail.com
Copyright (C) 2009-2014 Laboratorio de Biofísica Molecular - Universidad de Concepción. Chile.