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Cleanup docs
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cthoyt committed Mar 28, 2024
1 parent 32cd1ef commit 80b87f8
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Showing 2 changed files with 4 additions and 7 deletions.
8 changes: 4 additions & 4 deletions src/umls_downloader/umls.py
Original file line number Diff line number Diff line change
Expand Up @@ -156,14 +156,14 @@ def open_umls_semantic_types(
This file contains the following columns:
=== ========================================================================
==== ========================================================================
CUI Unique identifier of concept
TUI Unique identifier of Semantic Type
STN Semantic Type tree number
STY Semantic Type. The valid values are defined in the Semantic Network.
ATUI Unique identifier for attribute
CVF Content View Flag. Bit field used to flag rows included in Content View.
=== ========================================================================
==== ========================================================================
.. seealso:: https://www.ncbi.nlm.nih.gov/books/NBK9685/table/ch03.Tf/
"""
Expand All @@ -186,7 +186,7 @@ def open_umls_hierarchy(
This file contains the following columns:
=== ==========================================================================
==== ==========================================================================
CUI Unique identifier of concept
AUI Unique identifier of atom - variable length field, 8 or 9 characters
CXN Context number (e.g., 1, 2, 3)
Expand All @@ -196,7 +196,7 @@ def open_umls_hierarchy(
PTR Path to the top or root of the hierarchical context from this atom.
HCD Source asserted hierarchical number or code for this atom in this context.
CVF Content View Flag. Bit field used to flag rows included in Content View.
=== ==========================================================================
==== ==========================================================================
.. seealso:: https://www.ncbi.nlm.nih.gov/books/NBK9685/table/ch03.T.computable_hierarchies_file_mrhie
"""
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3 changes: 0 additions & 3 deletions tox.ini
Original file line number Diff line number Diff line change
Expand Up @@ -117,9 +117,6 @@ commands =
mkdir -p {envtmpdir}
cp -r source {envtmpdir}/source
python -m sphinx -W -b html -d {envtmpdir}/build/doctrees {envtmpdir}/source {envtmpdir}/build/html
python -m sphinx -W -b coverage -d {envtmpdir}/build/doctrees {envtmpdir}/source {envtmpdir}/build/coverage
cat {envtmpdir}/build/coverage/c.txt
cat {envtmpdir}/build/coverage/python.txt
allowlist_externals =
/bin/cp
/bin/cat
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