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Add image filename columns to CellProfiler presets #498

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Add image filename columns to CellProfiler presets

Add image filename columns to CellProfiler presets #498

Workflow file for this run

.github/workflows/test.yml at f2f96da
---
name: run tests
on:
push:
branches: [main]
pull_request:
branches: [main]
schedule:
# runs every Wednesday at 7 AM UTC
- cron: "0 7 * * 3"
jobs:
run_tests:
strategy:
matrix:
# matrixed execution for parallel gh-action performance increases
python_version: ["3.9", "3.10", "3.11", "3.12"]
os: [ubuntu-22.04, macos-13]
runs-on: ${{ matrix.os }}
env:
OS: ${{ matrix.os }}
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Python setup
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python_version }}
# remove poetry.lock file for scheduled tests
# to help simulate possible upstream issues
- name: Remove poetry.lock for scheduled tests
# runs every Wednesday at 7 AM UTC
if: github.event.schedule == '0 7 * * 3'
run: |
rm poetry.lock
- name: Setup for poetry
uses: ./.github/actions/setup-poetry
- name: Install environment
run: poetry install --no-interaction --no-ansi
- name: Run sphinx-docs build test
run: poetry run sphinx-build docs/source doctest -W
- name: Run pytest
run: poetry run pytest -m "not large_data_tests"
# run large data tests as a separate job to help
# conserve resources by detecting failure with
# smaller tests first.
run_large_data_tests:
runs-on: ubuntu-22.04
needs: run_tests
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Python setup
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Setup for poetry
uses: ./.github/actions/setup-poetry
- name: Install environment
run: poetry install --no-interaction --no-ansi
- name: Run pytest for large data tests
run: poetry run pytest -m "large_data_tests"