Address Installation Dependency Gaps #232
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Description
When installing Pycytominer using pip from Github hashes there is a dependency gap with
pyarrow
due to mismatches betweenrequirements.txt
andsetup.py
. This currently causes new functionality to be otherwise unavailable until the dependency is resolved manually.Changes in this PR update
setup.py
to referencerequirements.txt
when installing Pycytominer. I've also added capitalization for globals to help make these more visible from a style perspective.Many thanks go to @axiomcura for help in highlighting this issue!
What is the nature of your change?
Checklist
Please ensure that all boxes are checked before indicating that a pull request is ready for review.