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Inferring Features in feature_select.py #27

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merged 3 commits into from
Aug 16, 2019

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@gwaybio gwaybio commented Aug 16, 2019

Switching from "none" default to "infer" default. Expects that all cell painting features do not have "Metadata_" prefixes

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Codecov Report

Merging #27 into master will increase coverage by 0.32%.
The diff coverage is 84.61%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #27      +/-   ##
==========================================
+ Coverage   95.45%   95.77%   +0.32%     
==========================================
  Files          23       23              
  Lines         682      687       +5     
==========================================
+ Hits          651      658       +7     
+ Misses         31       29       -2
Impacted Files Coverage Δ
pycytominer/tests/test_get_na_columns.py 100% <ø> (ø) ⬆️
pycytominer/normalize.py 89.28% <ø> (ø) ⬆️
pycytominer/get_na_columns.py 100% <100%> (ø) ⬆️
pycytominer/variance_threshold.py 96.66% <100%> (+3.56%) ⬆️
pycytominer/correlation_threshold.py 96.42% <100%> (+3.83%) ⬆️
pycytominer/feature_select.py 92.1% <71.42%> (+0.43%) ⬆️

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@gwaybio gwaybio merged commit 768ddcc into cytomining:master Aug 16, 2019
@gwaybio gwaybio deleted the feature-select-infer branch August 16, 2019 20:17
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