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Create Mock-up heatmaps for DESeq Differential Expression Results #167

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afarrel opened this issue Aug 13, 2021 · 2 comments

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afarrel commented Aug 13, 2021

What are the scientific goals of the analysis?

Create mock-up heat maps for DESeq2 Results

What heat maps will you generate?

Gene: All Cancers vs All GTEx
Gene-Disease: 1 Cancer [all cohorts] vs All GTEx
Disease: 1 Cancer: All RMTL vs All GTEx
(Other Ideas)

What input data are required for this analysis?

Output results from DESeq module: ticket #164 and #76

How long do you expect is needed to complete the analysis? Will it be a multi-step analysis?

3 days

Who will complete the analysis?

afarrel self-assigned this

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afarrel commented Aug 25, 2021

HM_ALK_NBL_Test.pdf
HM_Test_All_ALK_Cluster.pdf
HM_Test_All_ALK.pdf

@jharenza @logstar @sangeetashukla

This is low priority but let me know if you have any thoughts/concerns/suggestions.

Author

afarrel commented Aug 25, 2021

HM_Test_RMTL_Disease_NBL_2.pdf

Up-regulated Relevant Molecular Targets for a Disease - Likely fo Disease Page

afarrel closed this as completed

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