Initial commit #27

	name: CI/CT/CD

	on:
	push:
	branches:
	- main
	pull_request:
	branches:
	- main

	jobs:
	build:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout code
	uses: actions/checkout@v2

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.11'

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r requirements.txt
	pip install pytest

	- name: Run unit tests
	run: \|
	pytest tests

	- name: Build PyPI package
	if: success()
	run: \|
	python setup.py sdist bdist_wheel

	- name: Publish to PyPI
	if: success()
	env:
	TWINE_USERNAME: __token__
	TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
	run: \|
	pip install twine
	twine upload dist/* --verbose

	- name: Install Conda
	if: success()
	uses: goanpeca/setup-miniconda@v2
	with:
	auto-update-conda: true
	miniforge-variant: Mambaforge
	python-version: 3.8

	- name: Build Conda package
	if: success()
	run: \|
	conda install conda-build anaconda-client
	conda config --set anaconda_upload no
	conda-build . --output-folder build_output

	- name: Publish to Conda
	if: success()
	env:
	ANACONDA_USER: ${{ secrets.CONDA_USERNAME }}
	ANACONDA_PASSWORD: ${{ secrets.CONDA_PASSWORD }}
	run: \|
	anaconda login --username $ANACONDA_USER --password $ANACONDA_PASSWORD
	anaconda upload build_output/*/pyorganoid-.tar.bz2 --force

	- name: Build documentation
	run: \|
	cd docs
	make clean
	make html

	- name: Deploy to GitHub Pages
	uses: peaceiris/actions-gh-pages@v3
	with:
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: docs/build/html

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