Skip to content

Commit

Permalink
Merge pull request #1784 from datadryad/ppr-or-curation
Browse files Browse the repository at this point in the history
More detail about PPR setting, double check it isn't going right to curation
  • Loading branch information
ryscher authored Jul 29, 2024
2 parents fd32d77 + 0bed46a commit fe7089e
Show file tree
Hide file tree
Showing 2 changed files with 11 additions and 5 deletions.
12 changes: 9 additions & 3 deletions app/models/stash_engine/resource.rb
Original file line number Diff line number Diff line change
Expand Up @@ -1088,6 +1088,7 @@ def prepare_for_curation
note: 'System set back to curation')
end

# rubocop:disable Metrics/AbcSize
def create_post_submission_status(prior_cur_act)
attribution = (prior_cur_act.nil? ? (current_editor_id || user_id) : prior_cur_act.user_id)
curation_note = ''
Expand All @@ -1104,16 +1105,20 @@ def create_post_submission_status(prior_cur_act)
target_status = previous_resource.last_curation_activity.status
curation_note = "Auto-published with minimal changes to #{changes.join(', ')}"
end

# Determine which submission status to use, :submitted or :peer_review status
elsif hold_for_peer_review? && previous_curated_resource.blank? && curation_start_date.blank?
# Moving this logic to user facing, will not allow PPR selection by user
elsif hold_for_peer_review? && identifier.allow_review?
publication_accepted = identifier.has_accepted_manuscript? || identifier.publication_article_doi
if publication_accepted
curation_note = "Private for peer review was requested, but associated manuscript #{manuscript} has already been accepted"
target_status = 'submitted'
update(hold_for_peer_review: false, peer_review_end_date: nil)
elsif identifier.date_last_curated.present?
curation_note = 'Private for peer review was requested, but the submission has already been curated'
target_status = 'submitted'
update(hold_for_peer_review: false, peer_review_end_date: nil)
else
curation_note = "Set to Private for peer review at author's request"
curation_note = "Set to Private for peer review at #{identifier.automatic_ppr? ? "journal's" : "author's"} request"
target_status = 'peer_review'
update(peer_review_end_date: Time.now.utc + 6.months)
end
Expand All @@ -1124,6 +1129,7 @@ def create_post_submission_status(prior_cur_act)
curation_activities << StashEngine::CurationActivity.create(user_id: attribution, status: target_status, note: curation_note)
target_status
end
# rubocop:enable Metrics/AbcSize

def auto_assign_curator(target_status:)
target_curator = identifier.most_recent_curator
Expand Down
4 changes: 2 additions & 2 deletions app/views/stash_datacite/peer_review/_review.html.erb
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
<div>
<p>This dataset will remain private for peer review until we receive a notification from the journal confirming formal acceptance of the associated manuscript.</p>
</div>
<% elsif @resource.identifier.allow_review? && @resource.previous_curated_resource.blank? && @resource.curation_start_date.blank? %>
<% elsif @resource.identifier.allow_review? && @resource.identifier.date_last_curated.blank? %>
<!-- This is only available if the id has not been curated AND
the associated journal allows a review workflow -->
<div>
Expand Down Expand Up @@ -33,6 +33,6 @@
</div>
<% else %>
<div>
<p>The private for peer review option is not available for this data submission<% if @resource.identifier.pub_state == 'published' %>, because the data has been previously published<% elsif @resource.identifier.has_accepted_manuscript? %>, because the associated article has been accepted for publication by the journal<% elsif @resource.identifier.publication_article_doi %>, because the associated article has been published by the journal<% elsif @resource.previous_curated_resource.present? || @resource.curation_start_date.present? %>, because the dataset has been submitted and entered curation<% end %>. Upon submission, the dataset will proceed to our curation process for evaluation and publication.</p>
<p>The private for peer review option is not available for this data submission<% if @resource.identifier.pub_state == 'published' %>, because the data has been previously published<% elsif @resource.identifier.has_accepted_manuscript? %>, because the associated article has been accepted for publication by the journal<% elsif @resource.identifier.publication_article_doi %>, because the associated article has been published by the journal<% elsif @resource.identifier.date_last_curated.present? %>, because the dataset has previously been submitted and entered curation<% end %>. Upon submission, the dataset will proceed to our curation process for evaluation and publication.</p>
</div>
<% end %>

0 comments on commit fe7089e

Please sign in to comment.