feat: Extract paper abstract metadata from open alex abstract inverte… #968
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| # build.yml | |
| on: | |
| # pull_request: | |
| # paths: | |
| # - desci-server/** | |
| push: | |
| paths: | |
| - .github/workflows/** | |
| - desci-server/** | |
| - desci-repo/** | |
| - desci-contracts/** | |
| - Dockerfile | |
| name: Test desci-server | |
| # https://docs.aws.amazon.com/cli/latest/userguide/cli-configure-envvars.html | |
| env: | |
| AWS_DEFAULT_REGION: us-east-2 | |
| AWS_DEFAULT_OUTPUT: json | |
| AWS_ACCOUNT_ID: ${{ secrets.AWS_ACCOUNT_ID }} | |
| AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| CONTAINER_IMAGE: desci-server | |
| DOCKER_BUILDKIT: 1 | |
| jobs: | |
| build-and-test: | |
| runs-on: ubuntu-latest | |
| # container: | |
| # image: ubuntu:latest | |
| # options: --user 1001 | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - name: Set up the environment | |
| # Replace this line with the appropriate setup for your project | |
| # Examples: | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version-file: ".nvmrc" | |
| check-latest: false | |
| cache: "yarn" | |
| cache-dependency-path: | | |
| desci-models/yarn.lock | |
| desci-server/yarn.lock | |
| desci-repo/yarn.lock | |
| - name: Set up docker-compose | |
| run: | | |
| sudo curl -L "https://github.com/docker/compose/releases/download/v2.18.1/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose | |
| sudo docker-compose --version | |
| docker info | |
| - name: Install dependencies | |
| run: cd desci-models && npm i -g yarn && yarn && yarn build && cd ../desci-server && yarn --ignore-engines && cd ../desci-repo && yarn | |
| - name: Stub contract | |
| run: | | |
| echo "{\"proxies\":[{\"address\":\"\"}]}" > desci-server/src/desci-contracts-config/unknown-research-object.json | |
| echo "{\"proxies\":[{\"address\":\"\"}]}" > desci-server/src/desci-contracts-config/unknown-dpid.json | |
| - name: Run tests | |
| run: | | |
| cd desci-server && export DOCKER_BUILDKIT=1 && yarn --ignore-engines && yarn test | |
| if [ $? -ne 0 ]; then | |
| exit 1 | |
| fi |