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install desimodel for tests #11

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install desimodel for tests

install desimodel for tests #11

Workflow file for this run

.github/workflows/python-package.yml at ce775be
# # Workflow is based on the Astropy GitHub actions workflow, ci_workflows.yml
name: CI
on:
push:
branches:
- '*'
pull_request:
branches:
- '*'
jobs:
tests:
name: Unit tests
runs-on: ${{ matrix.os }}
strategy:
fail-fast: true
matrix:
os: [ubuntu-latest] # Add more os?
python-version: [3.8, 3.9]
astropy-version: ['<5.0', '<5.1']
numpy-version: ['<1.20', '<1.21', '<1.22']
scipy-version: ['<1.6', '<1.7']
speclite-version: ['==0.19']
desiutil-version: ['3.4.2']
steps:
- name: Checkout code
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip wheel setuptools
python -m pip install pytest pytest-astropy pyyaml
python -m pip install 'scipy${{ matrix.scipy-version }}'
python -m pip install 'astropy${{ matrix.astropy-version }}'
python -m pip install 'numpy${{ matrix.numpy-version }}'
python -m pip install 'speclite${{ matrix.speclite-version }}'
python -m pip install git+https://github.com/desihub/desiutil.git@${{ matrix.desiutil-version }}
python -m pip install git+https://github.com/desihub/desimodel.git@0.09.1
- name: Run the test
run: pytest
coverage:
name: Test coverage
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: [3.9]
steps:
- name: Checkout code
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip wheel setuptools
python -m pip install pytest pytest-astropy coveralls
python -m pip install pyyaml numpy\<1.21 scipy\<1.6 astropy\<5.0 speclite==0.19
python -m pip install git+https://github.com/desihub/desiutil.git@3.4.2
python -m pip install git+https://github.com/desihub/desimodel.git@0.09.1
- name: Run the test with coverage
run: pytest --cov
- name: Coveralls
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }}
run: coveralls
docs:
name: Doc test
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: [3.9]
steps:
- name: Checkout code
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip wheel setuptools docutils\<0.18 Sphinx
python -m pip install git+https://github.com/desihub/desiutil.git@3.4.2
python -m pip install -e .[docs]
- name: Test the documentation
run: sphinx-build -W --keep-going -b html docs docs/_build/html
style:
name: Style test
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: [3.9]
steps:
- name: Checkout code
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip wheel setuptools flake8
- name: Test the style; failures are allowed
# This is equivalent to an allowed falure.
continue-on-error: true
run: flake8 specsim --count --max-line-length=100