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cell2cell - v0.6.6

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@earmingol earmingol released this 03 Mar 07:00
· 76 commits to master since this release

Please refer to the release notes of all previous versions here

Release Notes - cell2cell v0.6.6

New features

  • Added new attributes and methods to cell2cell.tensor.tensor.BaseTensor and any other
    derived class, including BaseTensor.shape, BaseTensor.write_file(), BaseTensor.to_device().
    These new features are respectively for:
    • Passing the shape of the tensor directly (instead of BaseTensor.tensor.shape)
    • Export or save a tensor object to a file.
    • Change the device for running Tensor-cell2cell (e.g. 'cpu', 'cuda', etc.)

Feature updates

  • Added **kwargs as parameter of cell2cell.analysis.tensor_pipelines.run_tensor_cell2cell_pipeline()
    to directly pass parameters to the functions running the elbow analysis and the tensor decomposition.
  • Sort factors numerically in cell2cell.external.gseapy.run_gsea().

Fixed Bugs