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Installing extension rhdf5filters 1.2.0 (in R-bundle-Bioconductor-3.12-foss-2020b-R-4.0.3.eb) fails on aarch64 with the error:
configure: error: Need GCC to support X86 CPU features tests
Workaround is to use the following
('rhdf5filters', '1.2.0', { 'checksums': ['58df019a2c8626cc236ebe19d44b830a6c3b5f787ea4090d5b57454a88d676cb'], 'installopts': '--configure-args="ax_cv_gcc_check_x86_cpu_init=yes ax_cv_gcc_x86_cpu_supports_sse2=no"', }),
but this will not be wanted on x86_64. Instead some patching of the configure file should be used.
(From a report on slack - I did not see this issue when installing on POWER.)
The text was updated successfully, but these errors were encountered:
It looks like this was fixed in a more recent version of rhdf5filters, see grimbough/rhdf5filters#6
rhdf5filters
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add patch for rhdf5filters extension in Bioconductor 3.12 bundle to f…
cd2a572
…ix installation on aarch64 (fixes easybuilders#12817)
Successfully merging a pull request may close this issue.
Installing extension rhdf5filters 1.2.0 (in R-bundle-Bioconductor-3.12-foss-2020b-R-4.0.3.eb) fails on aarch64 with the error:
Workaround is to use the following
but this will not be wanted on x86_64. Instead some patching of the configure file should be used.
(From a report on slack - I did not see this issue when installing on POWER.)
The text was updated successfully, but these errors were encountered: