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#2237 - Save multi reactions (pathway, single, edge cases) to RDF #4667

#2237 - Save multi reactions (pathway, single, edge cases) to RDF

#2237 - Save multi reactions (pathway, single, edge cases) to RDF #4667

GitHub Actions / ubuntu-latest-x86_64-dotnet_test_report failed Sep 18, 2024 in 0s

275 tests run, 271 passed, 0 skipped, 4 failed.

Annotations

Check failure on line 1 in api/c/tests/unit/tests/formats.cpp

See this annotation in the file changed.

@github-actions github-actions / ubuntu-latest-x86_64-dotnet_test_report

formats.ket_retrosynthetic_arrow

[FAILED]
Raw output
Diff:
- ket_retro_arrow_and_simple_arrow_2000.rxn:SUCCEED
+ ket_retro_arrow_and_simple_arrow_2000.rxn:FAILED
- output format: RXN 3000
+ --- 
- ket_retro_arrow_and_simple_arrow_3000.rxn:SUCCEED
- output format: SMILES
+ +++ 
- ket_retro_arrow_and_simple_arrow.smi:SUCCEED
- output format: SMARTS
+ @@ -2,17 +2,19 @@
- ket_retro_arrow_and_simple_arrow.smarts:SUCCEED
- output format: CML
+  
- ket_retro_arrow_and_simple_arrow.cml:SUCCEED
+   -INDIGO- 0100000000
+  
+ -  1  2
+ +  0  2
+  $MOL
+  
+    -INDIGO-01000000002D
+  
+ -  3  2  0  0  0  0  0  0  0  0999 V2000
+ -   12.6749   -5.8700    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ -   13.5409   -6.3700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   14.4070   -5.8700    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ +  4  3  0  0  0  0  0  0  0  0999 V2000
+ +    7.9339   -6.8700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.9339   -5.8700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.0679   -5.3700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    8.7999   -5.3700    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
+    1  2  1  0  0  0  0
+    2  3  1  0  0  0  0
+ +  2  4  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -30,16 +32,3 @@
+    3  2  1  0  0  0  0
+    2  1  1  0  0  0  0
+  M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  4  3  0  0  0  0  0  0  0  0999 V2000
+ -    7.9339   -6.8700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.9339   -5.8700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.0679   -5.3700    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.7999   -5.3700    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  2  4  1  0  0  0  0
+ -M  END
+ output format: RXN 3000
+ ket_retro_arrow_and_simple_arrow_3000.rxn:FAILED
+ --- 
+ +++ 
+ @@ -2,22 +2,24 @@
+  
+   -INDIGO- 0100000000
+  
+ -M  V30 COUNTS 1 2
+ +M  V30 COUNTS 0 2
+  M  V30 BEGIN REACTANT
+ +M  V30 END REACTANT
+ +M  V30 BEGIN PRODUCT
+  M  V30 BEGIN CTAB
+ -M  V30 COUNTS 3 2 0 0 0
+ +M  V30 COUNTS 4 3 0 0 0
+  M  V30 BEGIN ATOM
+ -M  V30 1 O 12.6749 -5.87002 0.0 0
+ -M  V30 2 C 13.5409 -6.37002 0.0 0
+ -M  V30 3 O 14.407 -5.87002 0.0 0
+ +M  V30 1 C 7.93391 -6.87002 0.0 0
+ +M  V30 2 C 7.93391 -5.87002 0.0 0
+ +M  V30 3 C 7.06788 -5.37003 0.0 0
+ +M  V30 4 N 8.79993 -5.37003 0.0 0
+  M  V30 END ATOM
+  M  V30 BEGIN BOND
+  M  V30 1 1 1 2
+  M  V30 2 1 2 3
+ +M  V30 3 1 2 4
+  M  V30 END BOND
+  M  V30 END CTAB
+ -M  V30 END REACTANT
+ -M  V30 BEGIN PRODUCT
+  M  V30 BEGIN CTAB
+  M  V30 COUNTS 5 5 0 0 0
+  M  V30 BEGIN ATOM
+ @@ -35,19 +37,5 @@
+  M  V30 5 1 2 1
+  M  V30 END BOND
+  M  V30 END CTAB
+ -M  V30 BEGIN CTAB
+ -M  V30 COUNTS 4 3 0 0 0
+ -M  V30 BEGIN ATOM
+ -M  V30 1 C 7.93391 -6.87002 0.0 0
+ -M  V30 2 C 7.93391 -5.87002 0.0 0
+ -M  V30 3 C 7.06788 -5.37003 0.0 0
+ -M  V30 4 N 8.79993 -5.37003 0.0 0
+ -M  V30 END ATOM
+ -M  V30 BEGIN BOND
+ -M  V30 1 1 1 2
+ -M  V30 2 1 2 3
+ -M  V30 3 1 2 4
+ -M  V30 END BOND
+ -M  V30 END CTAB
+  M  V30 END PRODUCT
+  M  END
+ output format: SMILES
+ ket_retro_arrow_and_simple_arrow.smi:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -OCO>>CC(N)C.C1CCCC1
+ +>>CC(N)C.C1CCCC1
+ output format: SMARTS
+ ket_retro_arrow_and_simple_arrow.smarts:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -[#8]-[#6]-[#8]>>[#6]1-[#6]-[#6]-[#6]-[#6]-1.[#6]-[#6](-[#7])-[#6]
+ +>>[#6]-[#6](-[#7])-[#6].[#6]1-[#6]-[#6]-[#6]-[#6]-1
+ output format: CML
+ ket_retro_arrow_and_simple_arrow.cml:FAILED
+ --- 
+ +++ 
+ @@ -1,36 +1,5 @@
+  <?xml version="1.0" ?>
+  <cml>
+  <reaction>
+ -<reactantList>
+ -<molecule>
+ -    <atomArray>
+ -        <atom id="a0" elementType="O" x2="12.6749" y2="-5.87002"/>
+ -        <atom id="a1" elementType="C" x2="13.5409" y2="-6.37002"/>
+ -        <atom id="a2" elementType="O" x2="14.407" y2="-5.87002"/>
+ -    </atomArray>
+ -    <bondArray>
+ -        <bond atomRefs2="a0 a1" order="1"/>
+ -        <bond atomRefs2="a1 a2" order="1"/>
+ -    </bondArray>
+ -</molecule>
+ -</reactantList>
+ -<productList>
+ -<molecule>
+ -    <atomArray>
+ -        <atom id="a0" elementType="C" x2="20.5624" y2="-5.20058"/>
+ -        <atom id="a1" elementType="C" x2="21.3714" y2="-5.78838"/>
+ -        <atom id="a2" elementType="C" x2="21.0624" y2="-6.73946"/>
+ -        <atom id="a3" elementType="C" x2="20.0624" y2="-6.73946"/>
+ -        <atom id="a4" elementType="C" x2="19.7535" y2="-5.78838"/>
+ -    </atomArray>
+ -    <bondArray>
+ -        <bond atomRefs2="a0 a4" order="1"/>
+ -        <bond atomRefs2="a4 a3" order="1"/>
+ -        <bond atomRefs2="a3 a2" order="1"/>
+ -        <bond atomRefs2="a2 a1" order="1"/>
+ -        <bond atomRefs2="a1 a0" order="1"/>
+ -    </bondArray>
+ -</molecule>
+ -</productList>
+  </reaction>
+  </cml>
- ket_two_retro_arrows_2000.rxn:SUCCEED
+ ket_two_retro_arrows_2000.rxn:FAILED
- output format: RXN 3000
+ --- 
- ket_two_retro_arrows_3000.rxn:SUCCEED
- output format: SMILES
+ +++ 
- ket_two_retro_arrows.smi:SUCCEED
- output format: SMARTS
+ @@ -2,7 +2,7 @@
- ket_two_retro_arrows.smarts:SUCCEED
- output format: CML
+  
- ket_two_retro_arrows.cml:SUCCEED
+   -INDIGO- 0100000000
+  
+ -  1  2
+ +  1  1
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -32,14 +32,3 @@
+    2  3  1  0  0  0  0
+    2  4  1  0  0  0  0
+  M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  3  2  0  0  0  0  0  0  0  0999 V2000
+ -   12.2703   -9.3147    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ -   13.1363   -9.8147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   14.0023   -9.3147    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -M  END
+ output format: RXN 3000
+ ket_two_retro_arrows_3000.rxn:FAILED
+ --- 
+ +++ 
+ @@ -2,7 +2,7 @@
+  
+   -INDIGO- 0100000000
+  
+ -M  V30 COUNTS 1 2
+ +M  V30 COUNTS 1 1
+  M  V30 BEGIN REACTANT
+  M  V30 BEGIN CTAB
+  M  V30 COUNTS 5 5 0 0 0
+ @@ -37,17 +37,5 @@
+  M  V30 3 1 2 4
+  M  V30 END BOND
+  M  V30 END CTAB
+ -M  V30 BEGIN CTAB
+ -M  V30 COUNTS 3 2 0 0 0
+ -M  V30 BEGIN ATOM
+ -M  V30 1 O 12.2703 -9.31472 0.0 0
+ -M  V30 2 C 13.1363 -9.81472 0.0 0
+ -M  V30 3 O 14.0023 -9.31472 0.0 0
+ -M  V30 END ATOM
+ -M  V30 BEGIN BOND
+ -M  V30 1 1 1 2
+ -M  V30 2 1 2 3
+ -M  V30 END BOND
+ -M  V30 END CTAB
+  M  V30 END PRODUCT
+  M  END
+ output format: SMILES
+ ket_two_retro_arrows.smi:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -C1CCCC1>>CC(N)C.OCO
+ +C1CCCC1>>CC(N)C
+ output format: SMARTS
+ ket_two_retro_arrows.smarts:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -[#6]1-[#6]-[#6]-[#6]-[#6]-1>>[#6]-[#6](-[#7])-[#6].[#8]-[#6]-[#8]
+ +[#6]1-[#6]-[#6]-[#6]-[#6]-1>>[#6]-[#6](-[#7])-[#6]
+ output format: CML
+ ket_two_retro_arrows.cml:FAILED
+ --- 
+ +++ 
+ @@ -33,17 +33,6 @@
+          <bond atomRefs2="a1 a3" order="1"/>
+      </bondArray>
+  </molecule>
+ -<molecule>
+ -    <atomArray>
+ -        <atom id="a0" elementType="O" x2="12.2703" y2="-9.31472"/>
+ -        <atom id="a1" elementType="C" x2="13.1363" y2="-9.81472"/>
+ -        <atom id="a2" elementType="O" x2="14.0023" y2="-9.31472"/>
+ -    </atomArray>
+ -    <bondArray>
+ -        <bond atomRefs2="a0 a1" order="1"/>
+ -        <bond atomRefs2="a1 a2" order="1"/>
+ -    </bondArray>
+ -</molecule>
+  </productList>
+  </reaction>
+  </cml>
- ket_simple_arrow_retro_arrow_sum_of_products_2000.rxn:SUCCEED
+ ket_simple_arrow_retro_arrow_sum_of_products_2000.rxn:FAILED
- output format: RXN 3000
+ --- 
- ket_simple_arrow_retro_arrow_sum_of_products_3000.rxn:SUCCEED
- output format: SMILES
+ +++ 
- ket_simple_arrow_retro_arrow_sum_of_products.smi:SUCCEED
- output format: SMARTS
+ @@ -2,7 +2,31 @@
- ket_simple_arrow_retro_arrow_sum_of_products.smarts:SUCCEED
- output format: CML
+  
- ket_simple_arrow_retro_arrow_sum_of_products.cml:SUCCEED
+   -INDIGO- 0100000000
+  
+ -  3  1
+ +  1  3
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  4  3  0  0  0  0  0  0  0  0999 V2000
+ +   10.1817   -8.8140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +   10.1817   -7.8140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    9.3157   -7.3140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +   11.0478   -7.3140    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  2  1  0  0  0  0
+ +  2  3  1  0  0  0  0
+ +  2  4  1  0  0  0  0
+ +M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  3  2  0  0  0  0  0  0  0  0999 V2000
+ +   14.9228   -7.8140    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ +   15.7888   -8.3140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +   16.6548   -7.8140    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  2  1  0  0  0  0
+ +  2  3  1  0  0  0  0
+ +M  END
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -35,27 +59,3 @@
+    2  3  2  0  0  0  0
+    3  1  1  0  0  0  0
+  M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  4  3  0  0  0  0  0  0  0  0999 V2000
+ -   10.1817   -8.8140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   10.1817   -7.8140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    9.3157   -7.3140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   11.0478   -7.3140    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  2  4  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  3  2  0  0  0  0  0  0  0  0999 V2000
+ -   14.9228   -7.8140    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ -   15.7888   -8.3140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   16.6548   -7.8140    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -M  END
+ output format: RXN 3000
+ ket_simple_arrow_retro_arrow_sum_of_products_3000.rxn:FAILED
+ --- 
+ +++ 
+ @@ -2,8 +2,36 @@
+  
+   -INDIGO- 0100000000
+  
+ -M  V30 COUNTS 3 1
+ +M  V30 COUNTS 1 3
+  M  V30 BEGIN REACTANT
+ +M  V30 BEGIN CTAB
+ +M  V30 COUNTS 4 3 0 0 0
+ +M  V30 BEGIN ATOM
+ +M  V30 1 C 10.1817 -8.81398 0.0 0
+ +M  V30 2 C 10.1817 -7.81398 0.0 0
+ +M  V30 3 C 9.3157 -7.31398 0.0 0
+ +M  V30 4 N 11.0478 -7.31398 0.0 0
+ +M  V30 END ATOM
+ +M  V30 BEGIN BOND
+ +M  V30 1 1 1 2
+ +M  V30 2 1 2 3
+ +M  V30 3 1 2 4
+ +M  V30 END BOND
+ +M  V30 END CTAB
+ +M  V30 END REACTANT
+ +M  V30 BEGIN PRODUCT
+ +M  V30 BEGIN CTAB
+ +M  V30 COUNTS 3 2 0 0 0
+ +M  V30 BEGIN ATOM
+ +M  V30 1 O 14.9228 -7.81398 0.0 0
+ +M  V30 2 C 15.7888 -8.31398 0.0 0
+ +M  V30 3 O 16.6548 -7.81398 0.0 0
+ +M  V30 END ATOM
+ +M  V30 BEGIN BOND
+ +M  V30 1 1 1 2
+ +M  V30 2 1 2 3
+ +M  V30 END BOND
+ +M  V30 END CTAB
+  M  V30 BEGIN CTAB
+  M  V30 COUNTS 5 5 0 0 0
+  M  V30 BEGIN ATOM
+ @@ -38,33 +66,5 @@
+  M  V30 5 1 3 1
+  M  V30 END BOND
+  M  V30 END CTAB
+ -M  V30 BEGIN CTAB
+ -M  V30 COUNTS 4 3 0 0 0
+ -M  V30 BEGIN ATOM
+ -M  V30 1 C 10.1817 -8.81398 0.0 0
+ -M  V30 2 C 10.1817 -7.81398 0.0 0
+ -M  V30 3 C 9.3157 -7.31398 0.0 0
+ -M  V30 4 N 11.0478 -7.31398 0.0 0
+ -M  V30 END ATOM
+ -M  V30 BEGIN BOND
+ -M  V30 1 1 1 2
+ -M  V30 2 1 2 3
+ -M  V30 3 1 2 4
+ -M  V30 END BOND
+ -M  V30 END CTAB
+ -M  V30 END REACTANT
+ -M  V30 BEGIN PRODUCT
+ -M  V30 BEGIN CTAB
+ -M  V30 COUNTS 3 2 0 0 0
+ -M  V30 BEGIN ATOM
+ -M  V30 1 O 14.9228 -7.81398 0.0 0
+ -M  V30 2 C 15.7888 -8.31398 0.0 0
+ -M  V30 3 O 16.6548 -7.81398 0.0 0
+ -M  V30 END ATOM
+ -M  V30 BEGIN BOND
+ -M  V30 1 1 1 2
+ -M  V30 2 1 2 3
+ -M  V30 END BOND
+ -M  V30 END CTAB
+  M  V30 END PRODUCT
+  M  END
+ output format: SMILES
+ ket_simple_arrow_retro_arrow_sum_of_products.smi:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -C1CCCC1.C1C=CC=C1.CC(N)C>>OCO
+ +CC(N)C>>C1CCCC1.C1C=CC=C1.OCO
+ output format: SMARTS
+ ket_simple_arrow_retro_arrow_sum_of_products.smarts:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -[#6]1-[#6]-[#6]-[#6]-[#6]-1.[#6]1-[#6]=[#6]-[#6]=[#6]-1.[#6]-[#6](-[#7])-[#6]>>[#8]-[#6]-[#8]
+ +[#6]-[#6](-[#7])-[#6]>>[#8]-[#6]-[#8].[#6]1-[#6]-[#6]-[#6]-[#6]-1.[#6]1-[#6]=[#6]-[#6]=[#6]-1
+ output format: CML
+ ket_simple_arrow_retro_arrow_sum_of_products.cml:FAILED
+ --- 
+ +++ 
+ @@ -2,42 +2,6 @@
+  <cml>
+  <reaction>
+  <reactantList>
+ -<molecule>
+ -    <atomArray>
+ -        <atom id="a0" elementType="C" x2="22.8103" y2="-7.14454"/>
+ -        <atom id="a1" elementType="C" x2="23.6193" y2="-7.73233"/>
+ -        <atom id="a2" elementType="C" x2="23.3103" y2="-8.68342"/>
+ -        <atom id="a3" elementType="C" x2="22.3103" y2="-8.68342"/>
+ -        <atom id="a4" elementType="C" x2="22.0013" y2="-7.73233"/>
+ -    </atomArray>
+ -    <bondArray>
+ -        <bond atomRefs2="a0 a4" order="1"/>
+ -        <bond atomRefs2="a4 a3" order="1"/>
+ -        <bond atomRefs2="a3 a2" order="1"/>
+ -        <bond atomRefs2="a2 a1" order="1"/>
+ -        <bond atomRefs2="a1 a0" order="1"/>
+ -    </bondArray>
+ -</molecule>
+ -<molecule>
+ -    <atomArray>
+ -        <atom id="a0" elementType="C" x2="26.2603" y2="-7.14393"/>
+ -        <atom id="a1" elementType="C" x2="26.7607" y2="-8.68402"/>
+ -        <atom id="a2" elementType="C" x2="27.0699" y2="-7.73779"/>
+ -        <atom id="a3" elementType="C" x2="25.7599" y2="-8.68402"/>
+ -        <atom id="a4" elementType="C" x2="25.4506" y2="-7.73779"/>
+ -    </atomArray>
+ -    <bondArray>
+ -        <bond atomRefs2="a0 a4" order="1"/>
+ -        <bond atomRefs2="a4 a3" order="2">
+ -            <bondStereo atomRefs4="a0 a4 a3 a1">C</bondStereo>
+ -        </bond>
+ -        <bond atomRefs2="a3 a1" order="1"/>
+ -        <bond atomRefs2="a1 a2" order="2">
+ -            <bondStereo atomRefs4="a3 a1 a2 a0">C</bondStereo>
+ -        </bond>
+ -        <bond atomRefs2="a2 a0" order="1"/>
+ -    </bondArray>
+ -</molecule>
+  <molecule>
+      <atomArray>
+          <atom id="a0" elementType="C" x2="10.1817" y2="-8.81398"/>

Check failure on line 1 in api/c/tests/unit/tests/formats.cpp

See this annotation in the file changed.

@github-actions github-actions / ubuntu-latest-x86_64-dotnet_test_report

formats.ket_to_rdf

[FAILED]
Raw output
Diff:
- pathway1.rdf:SUCCEED
+ pathway1.rdf:FAILED
- pathway10.rdf:SUCCEED
+ --- 
- pathway2.rdf:SUCCEED
- pathway3.rdf:SUCCEED
+ +++ 
+ @@ -7,23 +7,7 @@
+  
+   -INDIGO- 0100000000
+  
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  5  5  0  0  0  0  0  0  0  0999 V2000
+ -    0.9206   13.6931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.4210   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.7303   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.4203   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.1109   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -M  END
+ +  4  2
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -46,47 +30,37 @@
+  
+    -INDIGO-01000000002D
+  
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.7891   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.6551    9.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.5212   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.5212   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.6551   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.3872   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ +  5  5  0  0  0  0  0  0  0  0999 V2000
+ +    0.9206   13.6931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.4210   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.7303   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.4203   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.1109   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
+ +  5  4  2  0  0  0  0
+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+  M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  3  1
+  $MOL
+  
+    -INDIGO-01000000002D
+  
+    7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.7891   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.6551    9.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.5212   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.5212   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.6551   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.3872   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ +    7.3872    1.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.8876    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    8.1968    0.9463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.8868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.5775    0.9463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.3872    2.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    8.3872    2.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
+ +  5  4  2  0  0  0  0
+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+ +  1  6  2  0  0  0  0
+ +  6  7  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -114,26 +88,6 @@
+  
+    -INDIGO-01000000002D
+  
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    7.3872    1.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.8876    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.1968    0.9463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.8868    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.5775    0.9463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.3872    2.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.3872    2.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -  1  6  2  0  0  0  0
+ -  6  7  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+    9  9  0  0  0  0  0  0  0  0999 V2000
+     12.7532    6.8825    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+     14.4835    6.8830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ @@ -154,3 +108,23 @@
+    6  8  2  0  0  0  0
+    4  9  1  0  0  0  0
+  M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  7  7  0  0  0  0  0  0  0  0999 V2000
+ +    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    5.7891   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.6551    9.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.5212   10.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.5212   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.6551   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    8.3872   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  6  1  1  0  0  0  0
+ +  1  2  1  0  0  0  0
+ +  2  3  1  0  0  0  0
+ +  3  4  1  0  0  0  0
+ +  4  5  1  0  0  0  0
+ +  5  6  1  0  0  0  0
+ +  5  7  1  0  0  0  0
+ +M  END
+ pathway10.rdf:FAILED
+ --- 
+ +++ 
+ @@ -124,24 +124,6 @@
+  
+    -INDIGO-01000000002D
+  
+ -  6  6  0  0  0  0  0  0  0  0999 V2000
+ -    6.0401    3.2629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.5405    1.7228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.8497    2.6691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.5397    1.7228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.2303    2.6691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0401    4.2629    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -  1  6  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+    5  5  0  0  0  0  0  0  0  0999 V2000
+      7.8745   10.4722    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+      7.8708   11.4673    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ @@ -184,3 +166,21 @@
+    9  3  1  6  0  0  0
+   10  4  1  6  0  0  0
+  M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  6  6  0  0  0  0  0  0  0  0999 V2000
+ +    6.0401    3.2629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.5405    1.7228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.8497    2.6691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    5.5397    1.7228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    5.2303    2.6691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.0401    4.2629    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
+ +  5  4  2  0  0  0  0
+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+ +  1  6  1  0  0  0  0
+ +M  END
+ pathway2.rdf:FAILED
+ --- 
+ +++ 
+ @@ -7,23 +7,7 @@
+  
+   -INDIGO- 0100000000
+  
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  5  5  0  0  0  0  0  0  0  0999 V2000
+ -    0.9206    8.9452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.4210    7.4051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.7303    8.3514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.4203    7.4051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.1109    8.3514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -M  END
+ +  3  2
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -46,47 +30,17 @@
+  
+    -INDIGO-01000000002D
+  
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.2303    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.2303    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    5.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.8284    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.2303    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.2303    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    5.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.8284    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ +  5  5  0  0  0  0  0  0  0  0999 V2000
+ +    0.9206    8.9452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.4210    7.4051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.7303    8.3514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.4203    7.4051    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.1109    8.3514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
+ +  5  4  2  0  0  0  0
+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -132,3 +86,23 @@
+    6  8  2  0  0  0  0
+    4  9  1  0  0  0  0
+  M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  7  7  0  0  0  0  0  0  0  0999 V2000
+ +    5.2303    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    5.2303    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.0963    5.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.9624    5.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.9624    6.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.0963    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.8284    7.0401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  6  1  1  0  0  0  0
+ +  1  2  1  0  0  0  0
+ +  2  3  1  0  0  0  0
+ +  3  4  1  0  0  0  0
+ +  4  5  1  0  0  0  0
+ +  5  6  1  0  0  0  0
+ +  5  7  1  0  0  0  0
+ +M  END
+ pathway3.rdf:FAILED
+ --- 
+ +++ 
+ @@ -7,23 +7,7 @@
+  
+   -INDIGO- 0100000000
+  
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  5  5  0  0  0  0  0  0  0  0999 V2000
+ -    0.9206    6.0402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.4210    4.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.7303    5.4464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.4203    4.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.1109    5.4464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -M  END
+ +  2  2
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -46,47 +30,17 @@
+  
+    -INDIGO-01000000002D
+  
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.2303    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.2303    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    2.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.8284    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  1  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.2303    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    5.2303    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    2.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.9624    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.0963    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.8284    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
+ -  1  2  1  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ +  5  5  0  0  0  0  0  0  0  0999 V2000
+ +    0.9206    6.0402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.4210    4.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.7303    5.4464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.4203    4.5001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.1109    5.4464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
+ +  5  4  2  0  0  0  0
+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -112,3 +66,23 @@
+    6  8  2  0  0  0  0
+    4  9  1  0  0  0  0
+  M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  7  7  0  0  0  0  0  0  0  0999 V2000
+ +    5.2303    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    5.2303    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.0963    2.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.9624    2.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.9624    3.6351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    6.0963    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    7.8284    4.1351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  6  1  1  0  0  0  0
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+ +  4  5  1  0  0  0  0
+ +  5  6  1  0  0  0  0
+ +  5  7  1  0  0  0  0
+ +M  END
- pathway6.rdf:SUCCEED
+ pathway6.rdf:FAILED
- pathway7.rdf:SUCCEED
+ --- 
- pathway8.rdf:SUCCEED
- pathway9.rdf:SUCCEED
+ +++ 
+ @@ -7,23 +7,7 @@
+  
+   -INDIGO- 0100000000
+  
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
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+ -    0.4203   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    0.1109   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ -  3  1  1  0  0  0  0
+ -M  END
+ +  5  5
+  $MOL
+  
+    -INDIGO-01000000002D
+ @@ -46,81 +30,37 @@
+  
+    -INDIGO-01000000002D
+  
+ +  5  5  0  0  0  0  0  0  0  0999 V2000
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+ +    0.4203   12.1530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    0.1109   13.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  5  1  0  0  0  0
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+ +  4  2  1  0  0  0  0
+ +  2  3  2  0  0  0  0
+ +  3  1  1  0  0  0  0
+ +M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+    7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ -    7.5212   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.6551   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.3872   11.7880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  6  1  1  0  0  0  0
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+ -  2  3  1  0  0  0  0
+ -  3  4  1  0  0  0  0
+ -  4  5  1  0  0  0  0
+ -  5  6  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  1  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  3  3  0  0  0  0  0  0  0  0999 V2000
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+ -    1.7303   16.1931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    1.2297   17.0581    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  2  1  0  0  0  0
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+ +    7.8876    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    8.1968    0.9463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ +  4  2  1  0  0  0  0
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+    3  1  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  5  5  0  0  0  0  0  0  0  0999 V2000
+ -    7.5782   17.3950    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ -    6.7692   16.8072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
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+ -  4  3  1  0  0  0  0
+ -  3  2  1  0  0  0  0
+ -  2  1  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  3  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
+ -    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ -  6  1  1  0  0  0  0
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+ +  1  6  2  0  0  0  0
+ +  6  7  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -148,141 +88,13 @@
+  
+    -INDIGO-01000000002D
+  
+ -  7  7  0  0  0  0  0  0  0  0999 V2000
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+ -    8.3872    2.5401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  4  2  0  0  0  0
+ -  4  2  1  0  0  0  0
+ -  2  3  2  0  0  0  0
+ +  3  3  0  0  0  0  0  0  0  0999 V2000
+ +    0.7291   16.1931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.7303   16.1931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +    1.2297   17.0581    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ +  1  2  1  0  0  0  0
+ +  2  3  1  0  0  0  0
+    3  1  1  0  0  0  0
+ -  1  6  2  0  0  0  0
+ -  6  7  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  9  9  0  0  0  0  0  0  0  0999 V2000
+ -   12.7532    6.8825    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   14.4835    6.8830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   13.6200    7.3826    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   14.4835    5.8821    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ -   13.6222    5.3826    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   11.8872    5.3776    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   12.9151    4.6755    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -   15.1906    5.1750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  3  1  2  0  0  0  0
+ -  1  5  1  0  0  0  0
+ -  5  6  2  0  0  0  0
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+ -  4  2  2  0  0  0  0
+ -  2  3  1  0  0  0  0
+ -  5  7  1  0  0  0  0
+ -  6  8  2  0  0  0  0
+ -  4  9  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  1  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  5  5  0  0  0  0  0  0  0  0999 V2000
+ -    7.5782   17.3950    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.3872   16.8072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    8.0782   15.8561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    7.0782   15.8561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -    6.7692   16.8072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
+ -  1  5  1  0  0  0  0
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+ -  4  3  1  0  0  0  0
+ -  3  2  1  0  0  0  0
+ -  2  1  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  8  8  0  0  0  0  0  0  0  0999 V2000
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+ -  7  8  1  0  0  0  0
+ -  8  3  1  0  0  0  0
+ -  3  2  1  0  0  0  0
+ -M  END
+ -$RFMT
+ -$RXN
+ -
+ - -INDIGO- 0100000000
+ -
+ -  2  1
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  8  8  0  0  0  0  0  0  0  0999 V2000
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+ -  7  8  1  0  0  0  0
+ -  8  3  1  0  0  0  0
+ -  3  2  1  0  0  0  0
+ -M  END
+ -$MOL
+ -
+ -  -INDIGO-01000000002D
+ -
+ -  9  9  0  0  0  0  0  0  0  0999 V2000
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+ -   15.1906    5.1750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ -  5  7  1  0  0  0  0
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+ -  4  9  1  0  0  0  0
+  M  END
+  $MOL
+  
+ @@ -323,3 +135,85 @@
+   11 10  1  0  0  0  0
+   12  3  1  0  0  0  0
+  M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
+ +  7  7  0  0  0  0  0  0  0  0999 V2000
+ +    5.7891   11.2880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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+ +M  END
+ +$MOL
+ +
+ +  -INDIGO-01000000002D
+ +
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+ pathway7.rdf:FAILED
+ --- 
+ +++ 
+ @@ -7,7 +7,61 @@
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+    -INDIGO-01000000002D
+ @@ -160,65 +214,27 @@
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Check failure on line 1 in api/c/tests/unit/tests/formats.cpp

See this annotation in the file changed.

@github-actions github-actions / ubuntu-latest-x86_64-dotnet_test_report

formats.retrosynthetic_arrow_to_cdx

[FAILED]
Raw output
Diff:
- ket_retro_arrow_and_simple_arrow.b64cdx:SUCCEED
+ ket_retro_arrow_and_simple_arrow.b64cdx:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -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
+ 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
- ket_two_retro_arrows.b64cdx:SUCCEED
+ ket_two_retro_arrows.b64cdx:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -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
+ 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
- ket_simple_arrow_retro_arrow_sum_of_products.b64cdx:SUCCEED
+ ket_simple_arrow_retro_arrow_sum_of_products.b64cdx:FAILED
+ --- 
+ +++ 
+ @@ -1 +1 @@
+ -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
+ +VmpDRDAxMDAEAwIBAAAAAAAAAAAAAAAAAAAAAAUIBAAAAB4AGggCAAMAGwgCAAQAAAEkAAAAAgACAOn9BQBBcmlhbAMA6f0PAFRpbWVzIE5ldyBSb21hbgADMgAIAP///////wAAAAAAAP//AAAAAP////8AAAAA//8AAAAA/////wAAAAD/////AAD//wGAAAAAABAIAgABAA8IAgABAAOABAAAAASABQAAAAACCAALVtYA1E6sAgAABIAGAAAAAAIIAEv45wDck8QCAAAEgAcAAAAAAggAqIAEAchOuwIAAASACAAAAAACCACogAQB4E6dAgAABIAJAAAAAAIIAEv45wDICZQCAAAFgCIAAAAEBgQABQAAAAUGBAAJAAAAAAAFgCMAAAAEBgQACQAAAAUGBAAIAAAAAAAFgCQAAAAEBgQACAAAAAUGBAAHAAAAAAAFgCUAAAAEBgQABwAAAAUGBAAGAAAAAAAFgCYAAAAEBgQABgAAAAUGBAAFAAAAAAAAAAOACgAAAASACwAAAAACCABlUdYAMM8TAwAABIAMAAAAAAIIAE6FBAEs0iIDAAAEgA0AAAAAAggAPCLoACAZLAMAAASADgAAAAACCABOhQQBOMwEAwAABIAPAAAAAAIIADwi6AB8hPsCAAAFgCcAAAAEBgQACwAAAAUGBAAPAAAAAAAFgCgAAAAEBgQADwAAAAUGBAAOAAAAAAYCAAIAAAAFgCkAAAAEBgQADgAAAAUGBAAMAAAAAAAFgCoAAAAEBgQADAAAAAUGBAANAAAAAAYCAAIAAAAFgCsAAAAEBgQADQAAAAUGBAALAAAAAAAAAAOAEAAAAASAEQAAAAIEAgAIACsEAgABAAACCABaa+oAyK6/AQaAAAAAAAACCABaa+oAyK6/ASMIAQAAAAcOAAEAAAADAGAAyAAAAE9IAAAAAASAEgAAAAACCABYa/kApqnZAQAABIATAAAAAgQCAAgAKwQCAAEAAAIIAFpr6gD8pPMBBoAAAAAAAAIIAFpr6gD8pPMBIwgBAAAABw4AAQAAAAMAYADIAAAAT0gAAAAABYAsAAAABAYEABEAAAAFBgQAEgAAAAAABYAtAAAABAYEABIAAAAFBgQAEwAAAAAAAAADgBQAAAAEgBUAAAAAAggAVmsIAahzMQEAAASAFgAAAAACCABaa+oAqHMxAQAABIAXAAAAAAIIAFtr2wCaeBcBAAAEgBgAAAACBAIABwArBAIAAgAAAggAW2vbALxuSwEGgAAAAAAAAggAW2vbALxuSwEjCAEAAAAHGQACAAAAAwBgAMgAAAACAAMAIADIAAAATkgyAAAAAAWALgAAAAQGBAAVAAAABQYEABYAAAAAAAWALwAAAAQGBAAWAAAABQYEABcAAAAAAAWAMAAAAAQGBAAWAAAABQYEABgAAAAAAAAAIYAZAAAABAIQAFhr7QA0kJoBWGvtADrFZgE3CgIAAAAvCgIAAQAgCgIAyggxCgIAMwI1CgIAAgAwCgIAGQAHAgwANJCaAVhr7QAAAAAACAIMADrFZgFYa+0AAAAAAAAAIYAcAAAABAIQAP//7AD4wHAC///sAABAJwI3CgIAAAA1CgIAAgAvCgIAAwAgCgIAWAIwCgIAWAIxCgIAlgAzCgIAWAIHAgwA+EBwAv//7AAAAAAACAIMAADAJwL//+wAAAAAAAAAB4AxAAAAEwAEABwAAAAACgIAAQACCgIAIAAgCgIAWAIEAhAA///sAPhAcAL//+wAAMAnAgAAB4AfAAAABAIQAFpr+QDMjuECWuvxAMyO4QIACgIABwAHCgIACAAAAA2AAAAAAA6AAAAAAAEMCAAEAAAACgAAAAIMBAAQAAAABAwEABkAAAAAAA6AAAAAAAEMBAAUAAAAAgwIAAQAAAAKAAAABAwEADEAAAAAAAAAAAAAAAAA

Check failure on line 1 in api/c/tests/unit/tests/formats.cpp

See this annotation in the file changed.

@github-actions github-actions / ubuntu-latest-x86_64-dotnet_test_report

formats.retrosynthetic_arrow_to_cdxml

[FAILED]
Raw output
Diff:
- ket_retro_arrow_and_simple_arrow.cdxml:SUCCEED
+ ket_retro_arrow_and_simple_arrow.cdxml:FAILED
+ --- 
+ +++ 
+ @@ -63,7 +63,7 @@
+          <arrow id="22" BoundingBox="548.343567 174.181381 494.575592 174.181381" FillType="None" ArrowheadType="Solid" HeadSize="2250" ArrowheadWidth="563" ArrowheadHead="Full" ArrowheadCenterSize="25" Head3D="548.343567 174.181381 0.000000" Tail3D="494.575592 174.181381 0.000000"/>
+          <scheme>
+              <step ReactionStepReactants="4" ReactionStepProducts="9" ReactionStepArrows="35"/>
+ -            <step ReactionStepReactants="15" ReactionStepProducts="4" ReactionStepArrows="22"/>
+ +            <step ReactionStepArrows="22"/>
+          </scheme>
+      </page>
+  </CDXML>
- ket_two_retro_arrows.cdxml:SUCCEED
+ ket_two_retro_arrows.cdxml:FAILED
+ --- 
+ +++ 
+ @@ -18,45 +18,45 @@
+      </colortable>
+      <page HeightPages="1" WidthPages="1">
+          <fragment id="4">
+ -            <n id="5" p="604.733582 259.358429"/>
+ -            <n id="6" p="629.003235 276.992188"/>
+ -            <n id="7" p="619.733337 305.524841"/>
+ -            <n id="8" p="589.733765 305.524841"/>
+ -            <n id="9" p="580.463867 276.992188"/>
+ -            <b id="25" B="5" E="9"/>
+ -            <b id="26" B="9" E="8"/>
+ -            <b id="27" B="8" E="7"/>
+ -            <b id="28" B="7" E="6"/>
+ -            <b id="29" B="6" E="5"/>
+ +            <n id="5" Element="8" NumHydrogens="1" p="368.108398 279.441620">
+ +                <t p="368.108398 279.441620" LabelJustification="Left">
+ +                    <s font="3" size="10" face="96">OH</s>
+ +                </t>
+ +            </n>
+ +            <n id="6" p="394.088348 294.441589"/>
+ +            <n id="7" Element="8" NumHydrogens="1" p="420.070129 279.441620">
+ +                <t p="420.070129 279.441620" LabelJustification="Left">
+ +                    <s font="3" size="10" face="96">OH</s>
+ +                </t>
+ +            </n>
+ +            <b id="25" B="5" E="6"/>
+ +            <b id="26" B="6" E="7"/>
+          </fragment>
+ -        <fragment id="10">
+ -            <n id="11" p="225.877441 309.441589"/>
+ -            <n id="12" p="225.877441 279.441620"/>
+ -            <n id="13" p="199.896759 264.441650"/>
+ -            <n id="14" Element="7" NumHydrogens="2" p="251.858231 264.441650">
+ +        <fragment id="8">
+ +            <n id="9" p="604.733582 259.358429"/>
+ +            <n id="10" p="629.003235 276.992188"/>
+ +            <n id="11" p="619.733337 305.524841"/>
+ +            <n id="12" p="589.733765 305.524841"/>
+ +            <n id="13" p="580.463867 276.992188"/>
+ +            <b id="27" B="9" E="13"/>
+ +            <b id="28" B="13" E="12"/>
+ +            <b id="29" B="12" E="11"/>
+ +            <b id="30" B="11" E="10"/>
+ +            <b id="31" B="10" E="9"/>
+ +        </fragment>
+ +        <fragment id="14">
+ +            <n id="15" p="225.877441 309.441589"/>
+ +            <n id="16" p="225.877441 279.441620"/>
+ +            <n id="17" p="199.896759 264.441650"/>
+ +            <n id="18" Element="7" NumHydrogens="2" p="251.858231 264.441650">
+                  <t p="251.858231 264.441650" LabelJustification="Left">
+                      <s font="3" size="10" face="96">NH</s>
+                      <s font="3" size="10" face="32">2</s>
+                  </t>
+              </n>
+ -            <b id="30" B="11" E="12"/>
+ -            <b id="31" B="12" E="13"/>
+ -            <b id="32" B="12" E="14"/>
+ -        </fragment>
+ -        <fragment id="15">
+ -            <n id="16" Element="8" NumHydrogens="1" p="368.108398 279.441620">
+ -                <t p="368.108398 279.441620" LabelJustification="Left">
+ -                    <s font="3" size="10" face="96">OH</s>
+ -                </t>
+ -            </n>
+ -            <n id="17" p="394.088348 294.441589"/>
+ -            <n id="18" Element="8" NumHydrogens="1" p="420.070129 279.441620">
+ -                <t p="420.070129 279.441620" LabelJustification="Left">
+ -                    <s font="3" size="10" face="96">OH</s>
+ -                </t>
+ -            </n>
+ +            <b id="32" B="15" E="16"/>
+              <b id="33" B="16" E="17"/>
+ -            <b id="34" B="17" E="18"/>
+ +            <b id="34" B="16" E="18"/>
+          </fragment>
+          <arrow id="19" BoundingBox="326.446075 277.941620 284.406555 277.941620" FillType="None" ArrowheadHead="Full" ArrowheadType="Angle" HeadSize="600" ArrowheadCenterSize="600" ArrowheadWidth="150" ArrowShaftSpacing="600" Head3D="325.946075 277.941620 0.000000" Tail3D="284.906555 277.941620 0.000000"/>
+          <graphic id="35" SupersededBy="19" GraphicType="Line" ArrowType="RetroSynthetic" HeadSize="600" BoundingBox="325.946075 277.941620 284.906555 277.941620"/>
- ket_simple_arrow_retro_arrow_sum_of_products.cdxml:SUCCEED
+ ket_simple_arrow_retro_arrow_sum_of_products.cdxml:FAILED
+ --- 
+ +++ 
+ @@ -76,7 +76,7 @@
+          <graphic id="31" BoundingBox="737.557800 249.419342 737.557800 241.919342" GraphicType="Symbol" SymbolType="Plus"/>
+          <scheme>
+              <step ReactionStepReactants="4 10" ReactionStepProducts="16" ReactionStepArrows="25"/>
+ -            <step ReactionStepReactants="20" ReactionStepProducts="16" ReactionStepArrows="49"/>
+ +            <step ReactionStepReactants="20" ReactionStepProducts="4 10" ReactionStepArrows="49"/>
+          </scheme>
+      </page>
+  </CDXML>