publish #44
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| name: "publish" | |
| on: | |
| create: | |
| tags: | |
| - '*' | |
| # This is the example from the readme. | |
| # On each push to the `release` branch it will create or update a GitHub release, build your app, and upload the artifacts to the release. | |
| env: | |
| CARGO_TERM_COLOR: always | |
| BINARIES_LIST: 'ncbi estimate_capacity build_db classify build_k2_db inspect seqid2taxid' | |
| PROJECT_PREFIX: 'kraken_rust_' | |
| jobs: | |
| build-and-release: | |
| permissions: | |
| contents: write | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [macos-latest, ubuntu-20.04, windows-latest] | |
| runs-on: ${{ matrix.platform }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build | |
| run: cargo build --release | |
| # Set up the GitHub CLI | |
| - name: Install GitHub CLI | |
| run: | | |
| brew install gh | |
| if: matrix.platform == 'macos-latest' | |
| - name: Install GitHub CLI | |
| run: | | |
| sudo apt install -y gh | |
| if: matrix.platform == 'ubuntu-20.04' | |
| - name: Install GitHub CLI | |
| run: | | |
| choco install gh | |
| if: matrix.platform == 'windows-latest' | |
| # Log in to the GitHub CLI | |
| - name: Login to GitHub CLI | |
| run: echo "${{ secrets.GITHUB_TOKEN }}" | gh auth login --with-token | |
| # # Create a release | |
| # - name: Create Release | |
| # id: create_release | |
| # run: | | |
| # gh release create ${{ github.ref_name }} \ | |
| # --title "Release ${{ github.ref_name }}" \ | |
| # --notes "Release notes for ${{ github.ref_name }}" \ | |
| # --draft | |
| # shell: bash | |
| - name: Prepare asset name | |
| run: | | |
| PLATFORM_TAG=$(echo ${{ matrix.platform }} | sed -e 's/-latest//' -e 's/ubuntu-20.04/linux-x86_64/' -e 's/macos/macos-x86_64/' -e 's/windows/windows-x86_64/') | |
| echo "ASSET_NAME=${PROJECT_PREFIX}${PLATFORM_TAG}.tar.gz" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Create tar.gz archive | |
| run: | | |
| mkdir -p ./target/release/packaged | |
| for binary in ${{ env.BINARIES_LIST }}; do | |
| cp "./target/release/$binary" "./target/release/packaged/" | |
| done | |
| tar czvf "./target/release/${{ env.ASSET_NAME }}" -C "./target/release/packaged/" . | |
| shell: bash | |
| - name: Upload Release Asset | |
| run: | | |
| mv ./target/release/ncbi ./target/release/${{ env.ASSET_NAME }} | |
| gh release upload ${{ github.ref_name }} \ | |
| ./target/release/${{ env.ASSET_NAME }} \ | |
| --clobber | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| shell: bash | |
| # This step is for building on CentOS 7, only run on ubuntu-latest | |
| - name: Build on CentOS 7 | |
| if: matrix.platform == 'ubuntu-20.04' | |
| run: | | |
| docker run --name centos7-container -v $GITHUB_WORKSPACE:/github/workspace -w /github/workspace centos:7 \ | |
| /bin/bash -c "yum update -y && yum install -y gcc make openssl openssl-devel && curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y && export PATH=\$HOME/.cargo/bin:\$PATH && cd /github/workspace && cargo build --release" | |
| mkdir -p ./target/release/packaged_centos7 | |
| for binary in $BINARIES_LIST; do | |
| docker cp centos7-container:/github/workspace/target/release/$binary ./target/release/packaged_centos7/ | |
| done | |
| tar czvf ./${PROJECT_PREFIX}centos7.tar.gz -C ./target/release/packaged_centos7 . | |
| docker rm centos7-container | |
| - name: Upload Release Asset for CentOS 7 | |
| if: matrix.platform == 'ubuntu-20.04' | |
| run: | | |
| gh release upload ${{ github.ref_name }} \ | |
| ./${PROJECT_PREFIX}centos7.tar.gz \ | |
| --clobber | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| shell: bash | |