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Fix tests

Fix tests #338

Workflow file for this run

---
on: push
jobs:
pytest:
runs-on: ubuntu-latest
steps:
- name: Checkout project
uses: actions/checkout@v3
- name: Set up python
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install .[test]
- name: Run pytest
run: pytest . --random-order --random-order-bucket=global --ignore=test/database/test_db_updater_integration.py --cov --cov-report=xml
- name: Upload coverage
uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # v3.1.4
integration:
runs-on: ubuntu-latest
services:
postgres:
image: postgres:latest
env:
POSTGRES_USER: postgres
POSTGRES_PASSWORD: password
POSTGRES_DB: interactive-reduction
ports:
- 5432:5432
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
steps:
- name: Checkout project
uses: actions/checkout@v3
- name: Checkout project
uses: actions/checkout@v3
- name: Set up python
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Set up cache for Python dependencies
uses: actions/cache@v2
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/pyproject.toml') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install .[test]
- name: Run integration tests
run: pytest --random-order --random-order-bucket=global test/database/test_db_updater_integration.py --cov --cov-report=xml
- name: Upload coverage
uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # v3.1.4