This release of FIRE will be more robust for denovo assemblies.
Some feats:
- Save the Fiber-seq data in cram format
- Replace ucsc utilities with
bigtools
- Replace some
bedtools
opts withgia
- Switch to
polars
for coverage calculation - Rename config options to uppercase variables
- fix #28 incorrect counts in a plot
- fix #26 so that fire appears to be deterministic now; however, this is not yet guaranteed.