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  1. torognes/vsearch torognes/vsearch Public

    Versatile open-source tool for microbiome analysis

    C++ 681 124

  2. torognes/swarm torognes/swarm Public

    A robust and fast clustering method for amplicon-based studies

    C++ 127 23

  3. vsearch-tests vsearch-tests Public

    unit tests for vsearch

    Shell 1

  4. swarm-tests swarm-tests Public

    Datasets and scripts to test the amplicon clustering method swarm

    Shell 2

  5. mumu mumu Public

    C++ implementation of lulu, a R package for post-clustering curation of metabarcoding data

    Shell 7

  6. stampa stampa Public

    Sequence Taxonomic Assignment by Massive Pairwise Alignments

    Shell 14 3