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Version 0.4.0
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@agitter agitter released this 26 Jan 12:43
· 153 commits to master since this release
v0.4.0
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Learn about vigilant mode.

Changes in version 0.4.0 include:

  • Support three modes of execution: MATLAB, compiled MATLAB executables with MATLAB runtime, or Docker
  • The SINGE workflow has been split in GLG and Aggregate steps
  • A wrapper script supports running the GLG and Aggregate steps individually or the entire workflow
  • Increase robustness of hyperparameter parsing
  • Add script to generate hyperparameter file
  • Add usage guidelines
  • Update Docker images are built on Travis CI
  • Generalize Docker image to work outside the SINGE git repository
  • Add default entrypoint to Docker image
  • Test cases assert that the source code matches the compiled MATLAB executables
  • All remaining instances of the old name SCINGE have been changed to SINGE
  • Rename data1/tf.mat to data1/gene_list.mat and added data3 dataset

DOI

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